Strain Fitness in Pseudomonas simiae WCS417 around PS417_13005

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,840,242	+				+0.3
2,840,288	+				-0.3
2,840,289	-				-0.1
2,840,363	+				+0.1
2,840,364	-				+0.5
2,840,364	-				-0.4
2,840,518	+				+1.0
2,840,533	-				+0.7
2,840,533	-				-0.3
2,840,533	-				-0.4
2,840,535	+				-0.3
2,840,543	+				-0.7
2,840,594	+				-0.2
2,840,595	-				+0.3
2,841,034	+				+0.7
2,841,192	+				-0.1
2,841,498	+		PS417_13005	0.41	-0.2
2,841,498	+		PS417_13005	0.41	-0.5
2,841,499	-		PS417_13005	0.41	-0.8
2,841,794	+		PS417_13005	0.80	+0.5
2,841,956	+				+0.1
2,842,326	-		PS417_13010	0.46	+1.2
2,842,469	+		PS417_13010	0.64	-0.3
2,842,470	-		PS417_13010	0.65	+0.7
2,842,792	+				-1.1
2,842,798	+				+0.4
2,842,892	-		PS417_13015	0.13	-0.5