Strain Fitness in Pseudomonas simiae WCS417 around PS417_12190

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,646,871	+		PS417_12180	0.77	-0.5
2,646,876	+		PS417_12180	0.77	-0.2
2,646,876	+		PS417_12180	0.77	-0.9
2,646,877	-		PS417_12180	0.77	-0.2
2,646,997	+		PS417_12180	0.84	-0.3
2,647,160	-				-0.6
2,647,216	+				+0.1
2,647,217	-				+0.6
2,647,327	+				-0.3
2,647,798	+				-1.3
2,647,799	-				+0.1
2,647,799	-				+1.6
2,647,802	+				-0.3
2,647,803	-				-0.1
2,647,803	-				+0.1
2,647,999	-		PS417_12190	0.10	+0.7
2,648,218	+		PS417_12190	0.24	+1.3
2,648,219	-		PS417_12190	0.24	+0.6
2,648,674	-		PS417_12190	0.53	+1.8
2,649,210	+		PS417_12190	0.86	-0.0
2,649,752	-		PS417_12195	0.31	-0.0
2,649,752	-		PS417_12195	0.31	-0.0
2,649,884	-		PS417_12195	0.44	-0.8
2,649,884	-		PS417_12195	0.44	-0.0
2,650,040	-		PS417_12195	0.60	+1.1
2,650,040	-		PS417_12195	0.60	-0.1
2,650,132	+		PS417_12195	0.69	+0.3
2,650,147	+		PS417_12195	0.70	-0.3
2,650,210	+		PS417_12195	0.76	-0.3
2,650,211	-		PS417_12195	0.76	+0.4