Strain Fitness in Pseudomonas simiae WCS417 around PS417_11065

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,371,071	+		PS417_11060	0.38	-0.8
2,371,115	-		PS417_11060	0.42	+0.4
2,371,290	+		PS417_11060	0.56	-0.1
2,371,320	-		PS417_11060	0.59	+2.3
2,371,320	-		PS417_11060	0.59	-1.3
2,371,437	+		PS417_11060	0.68	+1.1
2,371,912	+				+0.7
2,372,052	+		PS417_11065	0.16	+1.2
2,372,052	+		PS417_11065	0.16	+0.2
2,372,053	-		PS417_11065	0.16	-2.1
2,372,134	-		PS417_11065	0.26	-0.1
2,372,376	+		PS417_11065	0.55	-0.5
2,372,403	+		PS417_11065	0.58	-0.9
2,372,409	+		PS417_11065	0.59	-0.8
2,372,409	+		PS417_11065	0.59	-1.8
2,372,430	+		PS417_11065	0.62	-2.2
2,372,523	+		PS417_11065	0.73	+0.8
2,372,524	-		PS417_11065	0.73	-1.5
2,372,583	+		PS417_11065	0.80	-1.5
2,372,748	+				+0.4
2,372,867	-				-0.1
2,372,873	-				-0.6
2,373,194	+		PS417_11070	0.35	-1.3
2,373,540	+		PS417_11070	0.73	-0.1
2,373,541	-				-0.0
2,373,541	-				+2.3
2,373,676	+		PS417_11070	0.87	-0.8
2,373,677	-		PS417_11070	0.88	+1.1
2,373,677	-				+2.3