Strain Fitness in Pseudomonas simiae WCS417 around PS417_10600

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,262,178	-		PS417_10595	0.18	-0.7
2,262,255	+		PS417_10595	0.25	-1.2
2,262,255	+		PS417_10595	0.25	+0.2
2,262,268	+		PS417_10595	0.26	+0.7
2,262,383	-		PS417_10595	0.35	-0.1
2,262,383	-		PS417_10595	0.35	-0.5
2,262,673	+		PS417_10595	0.60	-2.0
2,262,706	+		PS417_10595	0.62	-0.6
2,262,706	+		PS417_10595	0.62	+1.3
2,262,706	+		PS417_10595	0.62	+0.4
2,262,707	-		PS417_10595	0.62	-0.1
2,262,707	-		PS417_10595	0.62	-0.0
2,262,707	-		PS417_10595	0.62	-0.1
2,262,707	-		PS417_10595	0.62	+0.1
2,262,707	-		PS417_10595	0.62	+0.0
2,262,793	+		PS417_10595	0.70	-0.6
2,262,934	+		PS417_10595	0.81	-0.6
2,262,934	+		PS417_10595	0.81	+0.9
2,262,935	-		PS417_10595	0.81	+0.2
2,262,935	-		PS417_10595	0.81	+0.1
2,262,935	-		PS417_10595	0.81	+0.2
2,262,979	+		PS417_10595	0.85	-0.3
2,262,979	+				-0.4
2,262,979	+		PS417_10595	0.85	-0.1
2,262,980	-		PS417_10595	0.85	-1.1
2,263,041	-				+0.1
2,263,066	+				-0.9
2,263,066	+				-0.4
2,263,067	-				+0.5
2,263,075	+				+0.7
2,263,075	+				+1.8
2,263,075	+				+0.0
2,263,076	-				+0.4
2,263,076	-				+0.9
2,263,076	-				+0.3
2,263,076	-				-0.7
2,263,186	-		PS417_10600	0.25	-1.3
2,263,288	-		PS417_10600	0.62	-0.7
2,263,878	+		PS417_10605	0.25	-0.2
2,263,879	-		PS417_10605	0.25	-0.0
2,263,882	+		PS417_10605	0.26	-0.8
2,263,882	+		PS417_10605	0.26	-0.5
2,263,883	-		PS417_10605	0.26	+0.1
2,264,122	-		PS417_10605	0.42	-0.9