Strain Fitness in Pseudomonas simiae WCS417 around PS417_00100

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
20,997	-				-0.5
21,565	-				+1.4
21,565	-				+0.8
21,565	-				-0.2
21,565	-				-1.1
21,585	-				-0.2
21,675	-				+0.4
21,678	-				+0.6
21,678	-				+0.6
21,678	-				+1.1
21,720	-				+0.4
21,720	-				-3.5
21,856	+		PS417_00100	0.21	-2.1
21,856	+		PS417_00100	0.21	-1.0
21,857	-		PS417_00100	0.21	-0.2
21,857	-		PS417_00100	0.21	-0.9
21,857	-		PS417_00100	0.21	-0.8
21,953	+		PS417_00100	0.33	+1.8
21,973	+		PS417_00100	0.36	-1.0
21,998	+		PS417_00100	0.39	-1.0
21,998	+		PS417_00100	0.39	-0.4
21,998	+		PS417_00100	0.39	-0.6
21,999	-		PS417_00100	0.39	-0.8
22,170	+		PS417_00100	0.61	-0.9
22,382	-		PS417_00100	0.89	+1.1
22,468	+				+0.0
22,468	+				+0.1
22,473	-				-0.1
22,473	-				-0.2
22,481	-				+0.7
22,484	+				-1.8
22,484	+				+0.2
22,863	-				+0.4
23,317	+				-0.4
23,318	-				+0.4
23,318	-				+0.3
23,401	-				-0.3