Strain Fitness in Pseudomonas simiae WCS417 around PS417_09470

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,049,849	+		PS417_09465	0.14	+0.8
2,049,849	+		PS417_09465	0.14	-0.1
2,049,850	-		PS417_09465	0.15	-0.5
2,049,850	-		PS417_09465	0.15	+0.2
2,049,850	-		PS417_09465	0.15	-1.5
2,049,852	+		PS417_09465	0.15	-0.2
2,049,853	-		PS417_09465	0.15	-0.5
2,049,864	+		PS417_09465	0.17	+0.6
2,049,899	-		PS417_09465	0.23	-1.2
2,050,081	+		PS417_09465	0.55	+0.2
2,050,251	+		PS417_09465	0.86	-0.8
2,050,539	+				-0.8
2,050,539	+				-0.2
2,050,541	+				-0.3
2,050,542	-				+0.5
2,050,542	-				-0.2
2,050,646	+				-1.0
2,050,686	-				-0.4
2,050,819	-		PS417_09470	0.33	-0.7
2,050,888	-		PS417_09470	0.58	-0.4
2,051,119	-				-2.2
2,051,119	-				+0.1
2,051,119	-				-0.2
2,051,122	+				+0.6
2,051,138	+				-0.0
2,051,239	+				-0.8
2,051,239	+				-0.4
2,051,252	+				-0.9
2,051,261	+				-0.4
2,051,603	+		PS417_09475	0.32	-2.6
2,051,886	-		PS417_09475	0.56	-0.4