Strain Fitness in Pseudomonas simiae WCS417 around PS417_08320

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
1,821,464	+		PS417_08310	0.69	-0.5
1,821,577	+		PS417_08310	0.80	+0.4
1,821,578	-		PS417_08310	0.80	+0.1
1,821,904	-				-0.3
1,821,904	-				-1.7
1,821,907	+				-0.9
1,821,907	+				+0.3
1,821,907	+				-0.2
1,821,907	+				+2.3
1,821,907	+				+0.1
1,821,907	+				-0.1
1,821,907	+				-0.5
1,821,908	-				-0.1
1,821,908	-				-0.3
1,821,908	-				+0.9
1,821,908	-				-0.1
1,821,908	-				-0.9
1,821,911	+				-0.3
1,821,911	+				-0.4
1,821,911	+				+0.2
1,821,912	-				+0.7
1,821,912	-				-0.6
1,821,912	-				-1.4
1,821,950	+				-1.7
1,821,951	-				-0.9
1,821,951	-				-0.1
1,821,951	-				+0.1
1,821,969	-				+0.2
1,822,019	+				+0.3
1,822,019	+				-0.7
1,822,154	-		PS417_08315	0.55	-0.5
1,822,158	+		PS417_08315	0.57	-0.3
1,822,158	+		PS417_08315	0.57	-0.2
1,822,249	+				-1.7
1,822,249	+				-2.0
1,822,249	+				-0.3
1,822,249	+		PS417_08315	0.89	-0.9
1,822,250	-		PS417_08315	0.90	-0.3
1,822,250	-		PS417_08315	0.90	-0.6
1,822,250	-		PS417_08315	0.90	-0.2
1,822,252	-				+2.7
1,822,372	+				+0.2
1,822,372	+				+0.6
1,822,373	-				-0.4
1,822,379	-				-0.0
1,822,573	-		PS417_08320	0.33	+0.9
1,822,883	+		PS417_08320	0.73	+0.3
1,822,883	+		PS417_08320	0.73	-1.3
1,822,883	+		PS417_08320	0.73	-0.9
1,823,108	+				-1.6
1,823,137	+				-0.2
1,823,183	+				+0.1
1,823,385	+		PS417_08325	0.26	-0.1
1,823,385	+		PS417_08325	0.26	-1.7
1,823,470	+		PS417_08325	0.37	+0.1
1,823,470	+		PS417_08325	0.37	-0.7
1,823,470	+		PS417_08325	0.37	-0.1
1,823,471	-		PS417_08325	0.37	+0.4
1,823,471	-		PS417_08325	0.37	+0.3
1,823,568	+				+1.1
1,823,569	-		PS417_08325	0.49	-0.5
1,823,569	-		PS417_08325	0.49	+0.2
1,823,648	+		PS417_08325	0.59	-1.1
1,823,720	+		PS417_08325	0.68	-0.5
1,824,020	+		PS417_08330	0.12	-0.6
1,824,020	+		PS417_08330	0.12	-0.0
1,824,021	-		PS417_08330	0.13	+0.3