Strain Fitness in Pseudomonas simiae WCS417 around PS417_00465

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
90,535	-				-0.6
90,589	-				-0.7
90,594	-				+0.4
90,594	-				+0.0
90,610	-				-1.8
90,643	-				-0.8
90,675	+				+1.5
90,675	+				+0.3
90,676	-				+0.8
90,676	-				+0.2
90,676	-				-0.1
90,692	-				+0.4
90,729	+				-0.6
90,730	-				+0.1
90,908	+				+1.0
90,908	+				+0.9
90,909	-				-0.3
90,925	-				+0.0
90,981	-		PS417_00455	0.11	-0.4
91,143	-		PS417_00455	0.68	-1.0
91,143	-		PS417_00455	0.68	+1.0
91,231	+				-1.3
91,232	-				+0.1
91,274	-				-0.3
91,283	-				-0.8
91,289	+				-1.5
91,289	+				-1.1
91,300	-				-0.0
91,714	+				+0.1
91,714	+		PS417_00465	0.50	-0.5
91,714	+				+4.2
91,715	-		PS417_00465	0.50	-1.2
91,715	-		PS417_00465	0.50	-1.7
91,801	+		PS417_00465	0.69	-1.2
91,801	+		PS417_00465	0.69	+0.2
91,802	-		PS417_00465	0.69	-0.7
91,843	-		PS417_00465	0.78	+0.1
91,935	+				-0.4
91,936	-				+1.1
91,936	-				-1.1
91,942	+				-0.2
91,942	+				-0.9
91,945	+				-0.4
91,945	+				-0.5
91,945	+				-2.2
91,945	+				-0.6
91,945	+				-0.8
91,946	-				+0.5
91,946	-				-0.2
91,946	-				-0.7
91,946	-				+0.7
91,946	-				-0.3
92,090	+				-0.3
92,090	+				-1.4
92,185	+				+0.1
92,207	+				+0.0
92,207	+				-1.4
92,207	+				+0.5
92,207	+				+0.2
92,208	-				-0.0
92,208	-				-2.2
92,254	+				+0.1
92,254	+				-0.0
92,258	+				-0.1
92,259	-				+0.0
92,279	+				+0.8
92,279	+				+0.0
92,280	-				-1.6
92,531	+				-0.1
92,531	+				-0.0
92,557	+				-1.3
92,648	+				-0.1
92,663	+				+0.5
92,663	+				+1.4
92,663	+				+1.5
92,669	+				-1.1
92,693	-				+0.0
92,813	+		PS417_00470	0.10	+0.2
92,814	-		PS417_00470	0.10	+0.3
92,814	-		PS417_00470	0.10	+0.3
92,935	-		PS417_00470	0.19	-1.4