Strain Fitness in Pseudomonas simiae WCS417 around PS417_28100

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
6,063,914	+				-0.9
6,063,972	+				-0.7
6,063,972	+				+0.2
6,063,972	+				+0.6
6,063,972	+				+0.1
6,063,972	+				-0.1
6,063,973	-				-1.0
6,063,973	-				+2.9
6,063,973	-				-0.4
6,063,973	-				-1.2
6,063,973	-				+1.7
6,063,987	+				-0.3
6,063,987	+				+0.4
6,063,987	+				-0.7
6,063,988	-				+0.2
6,063,989	+				-0.1
6,063,990	-				+0.9
6,063,990	-				+0.6
6,063,990	-				-1.5
6,063,990	-				+1.3
6,063,992	+				-0.1
6,064,035	-				+1.1
6,064,035	-				-0.0
6,064,078	+				-0.0
6,064,078	+				+0.9
6,064,079	-				+0.4
6,064,312	-				-0.9
6,064,344	+				-0.0
6,064,344	+				-0.1
6,064,344	+				-0.0
6,064,344	+				+0.3
6,064,344	+				-1.1
6,064,344	+				+0.0
6,064,344	+				-1.8
6,064,345	-				-0.3
6,064,345	-				-0.9
6,064,345	-				-1.0
6,064,393	-				+0.5
6,064,773	+		PS417_28095	0.85	-1.3
6,065,001	+		PS417_28100	0.12	-1.2
6,065,110	+		PS417_28100	0.24	-1.5
6,065,397	+		PS417_28100	0.56	-0.6
6,065,398	-		PS417_28100	0.56	-1.5
6,065,454	+		PS417_28100	0.63	-0.4
6,065,454	+		PS417_28100	0.63	-0.0
6,065,454	+		PS417_28100	0.63	-0.4
6,065,455	-		PS417_28100	0.63	+0.1
6,065,532	+		PS417_28100	0.71	-1.1
6,065,780	-				-0.1
6,065,858	-				-0.7
6,065,884	-				+1.5
6,065,906	-				-1.3
6,065,974	+		PS417_28105	0.22	-0.3
6,065,974	+		PS417_28105	0.22	-2.4
6,065,974	+		PS417_28105	0.22	+0.9
6,065,975	-		PS417_28105	0.22	+0.4
6,065,975	-		PS417_28105	0.22	+1.4
6,065,975	-		PS417_28105	0.22	+1.4
6,065,975	-		PS417_28105	0.22	-0.2
6,065,975	-		PS417_28105	0.22	-0.3
6,065,979	-		PS417_28105	0.23	-0.6
6,066,050	+		PS417_28105	0.36	-1.7
6,066,069	+		PS417_28105	0.40	+1.1
6,066,070	-		PS417_28105	0.40	-0.9
6,066,086	+		PS417_28105	0.43	+1.5
6,066,087	-		PS417_28105	0.43	-0.9
6,066,178	+		PS417_28105	0.60	-0.3
6,066,178	+		PS417_28105	0.60	+1.0
6,066,179	-		PS417_28105	0.60	-1.0
6,066,179	-		PS417_28105	0.60	-1.5
6,066,409	+				-0.5
6,066,410	-				+0.8
6,066,410	-				-0.3
6,066,427	+				-0.8
6,066,471	+				-0.6
6,066,472	-				-1.5
6,066,492	+				-4.5
6,066,492	+				+0.4
6,066,493	-				-0.0
6,066,559	-		PS417_28110	0.36	+0.2
6,066,563	-		PS417_28110	0.38	+0.2
6,066,582	+		PS417_28110	0.46	-0.8
6,066,583	-		PS417_28110	0.46	-0.2
6,066,583	-		PS417_28110	0.46	+1.1
6,066,583	-		PS417_28110	0.46	-0.5
6,066,583	-		PS417_28110	0.46	+0.7
6,066,742	+				-0.1
6,066,743	-				-0.1
6,066,755	-				-0.1