Strain Fitness in Pseudomonas simiae WCS417 around PS417_21630

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
4,691,625	+				+0.9
4,691,625	+				-1.3
4,691,625	+				-0.3
4,691,625	+				+2.2
4,691,626	-				-0.9
4,691,626	-				-0.7
4,691,626	-				+1.9
4,691,626	-				-0.6
4,691,626	-				-1.3
4,691,696	+				+0.4
4,691,699	-				-0.7
4,691,699	-				-0.0
4,691,813	+				+0.9
4,691,834	+				-0.2
4,691,835	-				-0.1
4,691,930	+				+0.1
4,691,930	+				+0.8
4,691,931	-				-0.8
4,691,986	+				-0.5
4,691,986	+				-0.1
4,691,989	-				-0.7
4,692,045	-		PS417_21625	0.17	-0.7
4,692,623	+		PS417_21630	0.14	-2.9
4,692,632	+		PS417_21630	0.15	+0.7
4,692,948	+		PS417_21630	0.37	-1.1
4,693,236	-		PS417_21630	0.57	-0.7
4,693,293	-		PS417_21630	0.61	-0.5
4,693,561	+		PS417_21630	0.79	-1.0
4,693,761	+				-1.1
4,693,843	+				+0.7
4,693,844	-				-0.6
4,693,849	+				+1.2
4,693,849	+				-1.1
4,693,849	+				-0.9
4,693,849	+				-0.1
4,693,849	+				-0.5
4,693,860	+				+0.4
4,693,966	+				+1.3
4,693,966	+				-1.9
4,694,004	+				-0.7
4,694,004	+				-1.2
4,694,005	-				-0.5
4,694,084	+				+0.1
4,694,084	+				-0.5
4,694,084	+				+0.1
4,694,200	-				+0.1
4,694,200	-				+1.8
4,694,200	-				-0.1
4,694,252	-		PS417_21635	0.66	-0.2