Strain Fitness in Pseudomonas simiae WCS417 around PS417_21325

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
4,634,039	+		PS417_21320	0.11	-0.8
4,634,040	-				-0.7
4,634,166	-		PS417_21320	0.27	-0.7
4,634,166	-		PS417_21320	0.27	+0.5
4,634,540	+		PS417_21320	0.73	-1.9
4,634,610	+		PS417_21320	0.82	+1.1
4,634,799	+				-0.2
4,634,799	+				+1.2
4,634,800	-				+1.1
4,634,876	-				-0.1
4,634,996	+				-2.0
4,634,997	-				-2.5
4,634,997	-				-0.1
4,635,002	+				-0.5
4,635,002	+				+0.7
4,635,003	-				+0.7
4,635,329	+		PS417_21325	0.41	-1.5
4,635,330	-		PS417_21325	0.41	-0.5
4,635,330	-		PS417_21325	0.41	-0.5
4,635,330	-		PS417_21325	0.41	-0.2
4,635,330	-		PS417_21325	0.41	-0.4
4,635,467	+				+1.5
4,635,467	+		PS417_21325	0.55	-1.0
4,635,467	+		PS417_21325	0.55	-0.7
4,636,108	+		PS417_21330	0.13	+1.3
4,636,108	+		PS417_21330	0.13	+0.0
4,636,228	+		PS417_21330	0.21	+1.5
4,636,626	+		PS417_21330	0.47	-1.8
4,636,678	+				-1.8
4,636,678	+		PS417_21330	0.51	+0.5
4,636,679	-		PS417_21330	0.51	-0.4
4,636,831	+		PS417_21330	0.61	+1.0
4,636,831	+				+0.9
4,636,831	+		PS417_21330	0.61	-0.5
4,636,832	-		PS417_21330	0.61	+0.1