Strain Fitness in Pseudomonas simiae WCS417 around PS417_20580

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
4,470,174	+		PS417_20575	0.78	-0.1
4,470,174	+		PS417_20575	0.78	+2.8
4,470,332	+		PS417_20575	0.82	-0.4
4,471,044	+				+0.6
4,471,045	-				+0.5
4,471,045	-				-0.6
4,471,048	+				+0.5
4,471,048	+				-0.6
4,471,048	+				-0.3
4,471,048	+				+1.5
4,471,048	+				+0.7
4,471,049	-				+1.5
4,471,049	-				-0.1
4,471,049	-				-0.4
4,471,050	+				-1.1
4,471,050	+				+0.4
4,471,050	+				-0.1
4,471,050	+				-0.4
4,471,050	+				-0.5
4,471,050	+				+0.3
4,471,051	-				-1.1
4,471,051	-				+1.1
4,471,051	-				-0.6
4,471,051	-				-0.2
4,471,051	-				+0.6
4,471,059	+				-0.1
4,471,063	+				+0.2
4,471,063	+				+1.0
4,471,064	-				+0.4
4,471,207	+				-0.3
4,471,207	+				-0.0
4,471,207	+				-0.2
4,471,208	-				-0.7
4,471,287	+		PS417_20580	0.10	-0.1
4,471,288	-		PS417_20580	0.10	+0.0
4,471,288	-		PS417_20580	0.10	+0.4
4,471,405	+		PS417_20580	0.17	+0.3
4,471,677	-		PS417_20580	0.33	-0.8
4,471,745	+		PS417_20580	0.37	+0.3
4,471,746	-		PS417_20580	0.37	-0.4
4,471,848	-		PS417_20580	0.43	-0.3
4,471,848	-		PS417_20580	0.43	+2.4
4,471,852	-		PS417_20580	0.43	+0.7
4,471,852	-		PS417_20580	0.43	+1.0
4,471,852	-		PS417_20580	0.43	-1.1
4,471,852	-		PS417_20580	0.43	-0.2
4,471,852	-		PS417_20580	0.43	-0.6
4,471,934	-		PS417_20580	0.48	-0.1
4,471,934	-		PS417_20580	0.48	-0.8
4,472,006	+		PS417_20580	0.52	+1.3
4,472,006	+		PS417_20580	0.52	+1.2
4,472,043	+		PS417_20580	0.54	+1.2
4,472,059	+		PS417_20580	0.55	+2.6
4,472,060	-		PS417_20580	0.55	+0.9
4,472,060	-		PS417_20580	0.55	-0.4
4,472,185	+		PS417_20580	0.63	-1.7
4,472,185	+		PS417_20580	0.63	+0.7
4,472,185	+		PS417_20580	0.63	-0.1
4,472,185	+		PS417_20580	0.63	+0.2
4,472,185	+		PS417_20580	0.63	+1.9
4,472,185	+		PS417_20580	0.63	+1.2
4,472,186	-		PS417_20580	0.63	-0.7
4,472,196	+		PS417_20580	0.63	+1.7
4,472,196	+		PS417_20580	0.63	+0.4
4,472,519	-		PS417_20580	0.82	+0.1
4,472,642	+		PS417_20580	0.89	+0.9
4,472,669	-				-1.0
4,472,937	+				+0.4
4,473,002	-				-2.4
4,473,097	+				-0.2
4,473,097	+				+0.0
4,473,097	+				-0.6
4,473,114	-				+0.1
4,473,138	-				+3.6
4,473,140	-				-1.3
4,473,159	+				+0.4
4,473,160	-				-0.7
4,473,194	+				+0.3
4,473,194	+				+0.4
4,473,194	+				-1.3
4,473,194	+				-0.1
4,473,195	-				-1.0
4,473,293	-				-0.3
4,473,293	-				+0.5
4,473,576	-		PS417_20585	0.22	+0.2
4,473,588	+		PS417_20585	0.23	+1.0
4,473,589	-		PS417_20585	0.23	-0.2
4,473,623	-		PS417_20585	0.25	-0.7
4,473,716	+		PS417_20585	0.31	+0.5
4,473,716	+				-0.1
4,473,716	+		PS417_20585	0.31	-0.8
4,473,717	-		PS417_20585	0.31	+0.1
4,473,768	+		PS417_20585	0.34	+0.8
4,473,768	+		PS417_20585	0.34	+0.5
4,473,769	-		PS417_20585	0.34	-1.7