Strain Fitness in Pseudomonas simiae WCS417 around PS417_19160

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
4,139,665	+		PS417_19155	0.44	-0.2
4,139,665	+		PS417_19155	0.44	-0.4
4,139,666	-		PS417_19155	0.44	+0.3
4,139,666	-		PS417_19155	0.44	-0.3
4,139,762	-		PS417_19155	0.59	+0.3
4,139,846	-		PS417_19155	0.72	-1.2
4,139,997	+				-0.4
4,139,997	+				+0.6
4,139,998	-				+0.2
4,139,998	-				+0.3
4,140,001	+				-0.9
4,140,001	+				-0.6
4,140,002	-				+0.9
4,140,049	+				-0.1
4,140,049	+				+0.4
4,140,049	+				-0.1
4,140,146	+		PS417_19160	0.13	-0.8
4,140,181	+		PS417_19160	0.17	-0.6
4,140,181	+		PS417_19160	0.17	-1.5
4,140,181	+		PS417_19160	0.17	-0.6
4,140,182	-		PS417_19160	0.17	-0.0
4,140,340	+				+1.7
4,140,340	+		PS417_19160	0.34	-0.9
4,140,398	-		PS417_19160	0.40	-0.8
4,140,628	+		PS417_19160	0.64	-2.5
4,140,628	+		PS417_19160	0.64	-0.2
4,140,628	+		PS417_19160	0.64	-1.1
4,140,629	-		PS417_19160	0.64	-1.5
4,140,629	-		PS417_19160	0.64	-0.0
4,140,932	+				-0.3
4,140,932	+				-0.7
4,140,932	+				-0.4
4,141,089	+				-0.7
4,141,090	-				+0.0
4,141,090	-				-0.0
4,141,366	+				-0.9
4,141,393	+				+0.3
4,141,394	-				-1.2
4,141,394	-				-0.7
4,141,395	+				-0.4
4,141,395	+				+0.8
4,141,395	+				-0.5
4,141,412	-				+1.7
4,141,412	-				-0.3
4,141,412	-				+1.3
4,141,435	+				+0.2