Strain Fitness in Pseudomonas simiae WCS417 around PS417_18395

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
4,003,185	-				+0.4
4,003,298	-		PS417_18390	0.18	-2.0
4,003,298	-		PS417_18390	0.18	-0.5
4,003,460	-		PS417_18390	0.34	+0.3
4,003,719	-		PS417_18390	0.59	-1.7
4,003,774	-		PS417_18390	0.65	-0.5
4,003,774	-		PS417_18390	0.65	+1.0
4,003,817	-		PS417_18390	0.69	-0.0
4,003,817	-		PS417_18390	0.69	-0.4
4,003,875	-				+1.8
4,003,886	-		PS417_18390	0.76	+0.5
4,004,003	-		PS417_18390	0.87	-0.4
4,004,003	-		PS417_18390	0.87	+0.5
4,004,003	-		PS417_18390	0.87	-0.6
4,004,092	+				-0.5
4,004,281	-		PS417_18395	0.15	-0.3
4,004,545	-		PS417_18395	0.42	-0.6
4,004,660	-		PS417_18395	0.53	-0.8
4,004,941	-		PS417_18395	0.82	-0.5
4,005,810	+		PS417_18400	0.45	+0.7
4,005,810	+		PS417_18400	0.45	+0.7
4,005,810	+		PS417_18400	0.45	+0.4
4,005,972	+		PS417_18400	0.55	-0.4
4,005,973	-		PS417_18400	0.55	+0.5