Strain Fitness in Pseudomonas simiae WCS417 around PS417_16685

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
3,641,949	+		PS417_16680	0.24	-0.9
3,641,949	+		PS417_16680	0.24	-1.6
3,642,600	+		PS417_16680	0.82	+0.6
3,642,718	-				-0.5
3,642,853	-				-0.0
3,642,886	-				-0.1
3,643,326	-		PS417_16685	0.35	-1.4
3,643,763	+		PS417_16685	0.67	-0.2
3,643,763	+		PS417_16685	0.67	-0.3
3,643,764	-		PS417_16685	0.67	-1.0
3,643,790	+		PS417_16685	0.68	+0.0
3,643,790	+		PS417_16685	0.68	-0.4
3,643,790	+		PS417_16685	0.68	-0.5
3,643,791	-		PS417_16685	0.69	+0.1
3,643,791	-		PS417_16685	0.69	+0.1
3,643,792	+		PS417_16685	0.69	-0.7
3,643,793	-		PS417_16685	0.69	-0.5
3,643,829	+		PS417_16685	0.71	-2.2
3,643,830	-		PS417_16685	0.71	-0.4
3,644,044	+		PS417_16685	0.87	-1.6
3,644,045	-		PS417_16685	0.87	-2.1
3,644,301	+				+0.7
3,644,477	-		PS417_16690	0.38	+1.0
3,644,804	-				-0.4