Strain Fitness in Pseudomonas simiae WCS417 around PS417_15890

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
3,478,540	-		PS417_15880	0.83	-1.4
3,478,560	+		PS417_15880	0.87	-0.4
3,478,560	+		PS417_15880	0.87	+1.6
3,478,560	+				-1.3
3,478,561	-		PS417_15880	0.87	+0.3
3,478,561	-		PS417_15880	0.87	+0.5
3,478,636	-				-0.6
3,478,636	-				-0.7
3,478,813	-		PS417_15885	0.43	-2.0
3,478,937	+		PS417_15885	0.73	+0.9
3,478,967	+		PS417_15885	0.80	+0.3
3,479,042	-				-0.1
3,479,116	+				+0.2
3,479,685	+		PS417_15890	0.75	-1.7
3,479,686	-		PS417_15890	0.75	-1.2
3,479,751	-				-1.3
3,479,751	-		PS417_15890	0.87	+0.6
3,479,868	+				+0.3
3,479,869	+				+0.9
3,479,869	+				+0.3
3,479,870	-				-0.9
3,479,870	-				-0.7
3,479,962	+		PS417_15895	0.15	-1.7
3,479,963	-		PS417_15895	0.16	+1.0
3,480,110	-		PS417_15895	0.31	+0.3
3,480,151	+		PS417_15895	0.35	+0.3
3,480,285	-		PS417_15895	0.49	+0.5