Strain Fitness in Pseudomonas simiae WCS417 around PS417_14495

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
3,167,446	-		PS417_14490	0.62	-1.0
3,167,543	+		PS417_14490	0.66	+0.3
3,167,544	-		PS417_14490	0.66	+0.2
3,167,590	+		PS417_14490	0.68	-0.2
3,168,006	+		PS417_14490	0.88	-1.2
3,168,006	+		PS417_14490	0.88	-0.6
3,168,007	-		PS417_14490	0.88	+1.9
3,168,649	+		PS417_14495	0.15	-1.8
3,168,650	-		PS417_14495	0.15	-0.5
3,168,650	-		PS417_14495	0.15	-1.6
3,168,738	+		PS417_14495	0.18	-0.1
3,168,750	+		PS417_14495	0.19	+0.3
3,168,811	+		PS417_14495	0.21	-0.0
3,168,812	-		PS417_14495	0.21	-0.9
3,168,864	+		PS417_14495	0.23	-1.1
3,169,096	+		PS417_14495	0.31	-0.2
3,169,197	+		PS417_14495	0.35	-0.2
3,169,552	+				-0.3
3,169,553	-		PS417_14495	0.48	-0.9
3,169,611	+		PS417_14495	0.50	-0.5
3,169,611	+		PS417_14495	0.50	-1.1
3,169,612	-		PS417_14495	0.50	-0.8
3,169,652	-				+2.7
3,170,289	+				+0.7
3,170,290	-		PS417_14495	0.75	-0.3
3,170,457	+		PS417_14495	0.81	+0.2
3,170,668	-		PS417_14495	0.89	-1.8
3,171,012	-				+0.3
3,171,028	+				-0.9
3,171,653	+		PS417_14505	0.12	-0.1