Strain Fitness in Pseudomonas simiae WCS417 around PS417_14270

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
3,121,188	+				+0.7
3,121,225	+				+0.1
3,121,226	-				-0.3
3,121,338	+		PS417_14265	0.21	-0.3
3,121,339	-		PS417_14265	0.21	-1.0
3,121,339	-		PS417_14265	0.21	+1.0
3,121,672	+		PS417_14265	0.55	-0.9
3,121,672	+		PS417_14265	0.55	-0.4
3,121,673	-		PS417_14265	0.55	-0.7
3,121,690	+		PS417_14265	0.57	-0.7
3,121,851	-		PS417_14265	0.74	+1.4
3,121,993	-		PS417_14265	0.89	+0.7
3,122,045	+				+0.3
3,122,237	+				-0.9
3,122,237	+				-0.2
3,122,238	-				-0.7
3,122,238	-				-1.7
3,122,351	+		PS417_14270	0.17	+0.3
3,122,468	+		PS417_14270	0.28	-0.7
3,122,538	-		PS417_14270	0.35	+0.4
3,122,826	-		PS417_14270	0.63	+0.2
3,122,826	-		PS417_14270	0.63	+0.3
3,123,002	-		PS417_14270	0.80	-0.1
3,123,002	-		PS417_14270	0.80	-0.2
3,123,030	-				-0.7
3,123,030	-		PS417_14270	0.83	+1.7
3,123,030	-				-1.4
3,123,084	-		PS417_14270	0.88	+1.7
3,123,263	+				-0.1
3,123,337	-				+0.5
3,123,400	+				+0.4
3,123,552	+				-0.7
3,123,553	-		PS417_14275	0.18	-0.3
3,123,762	+		PS417_14275	0.41	-0.6
3,123,762	+		PS417_14275	0.41	-0.6
3,123,828	+		PS417_14275	0.48	-0.2
3,123,828	+		PS417_14275	0.48	-1.2
3,123,880	-		PS417_14275	0.53	+0.2
3,123,952	-		PS417_14275	0.61	-0.1
3,124,072	-		PS417_14275	0.74	-0.1
3,124,201	-				-0.1
3,124,201	-		PS417_14275	0.88	-0.9