Strain Fitness in Pseudomonas simiae WCS417 around PS417_13110

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,864,339	+		PS417_13105	0.59	+0.5
2,864,366	+		PS417_13105	0.62	+0.1
2,864,366	+		PS417_13105	0.62	-0.0
2,864,366	+		PS417_13105	0.62	-0.4
2,864,366	+		PS417_13105	0.62	+1.5
2,864,742	-				+1.9
2,864,742	-				+0.3
2,864,976	+				+0.2
2,865,229	-		PS417_13110	0.29	-2.0
2,865,331	+		PS417_13110	0.41	-0.7
2,865,342	-		PS417_13110	0.42	-0.0
2,865,483	+		PS417_13110	0.60	+0.1
2,865,483	+		PS417_13110	0.60	-3.8
2,865,483	+		PS417_13110	0.60	-1.2
2,865,483	+		PS417_13110	0.60	-0.7
2,865,484	-		PS417_13110	0.60	-2.7
2,865,630	+		PS417_13110	0.78	-0.4
2,865,636	+		PS417_13110	0.79	-0.3
2,865,636	+		PS417_13110	0.79	+0.0
2,865,636	+		PS417_13110	0.79	-0.2
2,865,735	+				-0.8
2,865,780	-				+0.2
2,865,879	+				+0.5
2,865,879	+				-0.6
2,865,891	+				+0.7
2,865,891	+				-0.8
2,865,892	-				+0.8
2,865,893	+				-0.4
2,866,086	-		PS417_13115	0.35	-0.7
2,866,118	+		PS417_13115	0.43	-0.6
2,866,324	-				-0.6
2,866,338	-				+0.2
2,866,338	-				+0.1
2,866,338	-				+0.1
2,866,338	-				-0.2
2,866,460	+				+0.3
2,866,460	+				-0.1
2,866,678	-				-3.0
2,866,678	-				-0.7
2,866,678	-				+0.7
2,866,678	-				+0.8
2,866,678	-				+0.1
2,866,678	-				-1.3
2,866,681	+				-0.3
2,866,681	+				+2.3
2,866,682	-				-0.9
2,866,682	-				+2.5
2,866,768	-		PS417_13120	0.15	-0.6
2,866,797	+		PS417_13120	0.18	+1.3
2,866,797	+		PS417_13120	0.18	-0.9