Strain Fitness in Pseudomonas simiae WCS417 around PS417_12165

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,640,797	+		PS417_12160	0.33	+0.1
2,640,797	+		PS417_12160	0.33	-0.3
2,640,797	+		PS417_12160	0.33	-1.8
2,640,868	+		PS417_12160	0.38	-0.1
2,641,289	+		PS417_12160	0.68	-2.0
2,641,290	-		PS417_12160	0.68	+0.1
2,641,290	-		PS417_12160	0.68	-1.0
2,641,746	+				-0.1
2,641,751	-				-0.4
2,641,817	+				+0.2
2,641,943	+		PS417_12165	0.11	+1.5
2,641,943	+		PS417_12165	0.11	+0.6
2,641,943	+		PS417_12165	0.11	+1.2
2,641,944	-		PS417_12165	0.11	+0.1
2,641,944	-		PS417_12165	0.11	+0.8
2,641,955	+		PS417_12165	0.11	-0.1
2,643,090	+		PS417_12165	0.84	+0.1
2,643,091	-		PS417_12165	0.84	+1.4
2,643,194	-				-1.1
2,643,245	-				-0.3
2,643,349	-				-0.1
2,643,679	-				+2.0
2,643,880	-		PS417_12170	0.51	-0.8
2,643,921	-		PS417_12170	0.55	-0.5
2,644,060	-		PS417_12170	0.69	-1.2
2,644,138	-				-0.5
2,644,138	-		PS417_12170	0.76	+0.3
2,644,138	-		PS417_12170	0.76	-2.0
2,644,194	+				+1.1
2,644,205	+		PS417_12170	0.83	-0.1
2,644,216	-		PS417_12170	0.84	+0.4