Strain Fitness in Pseudomonas simiae WCS417 around PS417_10485

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
2,237,505	-				-0.0
2,237,540	-				-0.6
2,237,541	+				-1.3
2,237,542	-				-0.1
2,237,572	+				-0.8
2,237,572	+				-0.7
2,237,629	+				+1.1
2,237,663	+				-0.0
2,237,663	+				+0.3
2,237,672	-				-0.2
2,237,672	-				+0.1
2,237,695	+				+0.1
2,237,773	-		PS417_10480	0.10	-2.2
2,237,988	+		PS417_10480	0.41	-0.1
2,238,399	+				-0.3
2,238,399	+				-0.1
2,238,925	+		PS417_10485	0.62	-1.0
2,238,925	+		PS417_10485	0.62	+0.0
2,238,925	+		PS417_10485	0.62	-0.2
2,239,125	+		PS417_10485	0.85	-0.2
2,239,125	+		PS417_10485	0.85	+0.4
2,239,126	-		PS417_10485	0.86	+0.7
2,239,126	-		PS417_10485	0.86	+0.5
2,239,126	-		PS417_10485	0.86	-0.9
2,239,321	+				+0.3
2,239,322	-				-2.1
2,239,527	+		PS417_10490	0.17	-1.0
2,239,527	+		PS417_10490	0.17	-1.1
2,239,527	+		PS417_10490	0.17	-1.7
2,239,572	-		PS417_10490	0.21	-0.4
2,239,852	+		PS417_10490	0.50	+0.0