Strain Fitness in Pseudomonas simiae WCS417 around PS417_07140

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
1,578,859	-				-0.2
1,578,927	+				+0.5
1,578,928	-				+0.7
1,578,928	-				+1.3
1,578,928	-				-0.8
1,579,146	+		PS417_07140	0.15	-2.1
1,579,357	-		PS417_07140	0.30	-4.1
1,579,357	-		PS417_07140	0.30	+0.5
1,579,357	-		PS417_07140	0.30	-1.3
1,579,849	+		PS417_07140	0.64	-0.0
1,580,145	+		PS417_07140	0.85	-1.5
1,580,239	-				-0.3
1,580,385	+				-1.0
1,580,385	+				-1.7
1,580,385	+				-1.0
1,580,386	-				+3.9
1,580,418	-				-0.4
1,580,422	+				-0.1
1,580,737	+				-0.2
1,580,757	+				+1.3
1,580,758	-				-0.7
1,580,872	-		PS417_07150	0.14	-0.4
1,580,875	+		PS417_07150	0.14	+0.5
1,580,875	+		PS417_07150	0.14	-0.2
1,580,875	+		PS417_07150	0.14	+0.4
1,581,216	+		PS417_07150	0.46	+0.2
1,581,216	+		PS417_07150	0.46	+0.3
1,581,217	-		PS417_07150	0.46	-0.0
1,581,357	+		PS417_07150	0.59	+1.9
1,581,358	-		PS417_07150	0.59	-0.2
1,581,358	-		PS417_07150	0.59	+0.1