Strain Fitness in Pseudomonas simiae WCS417 around PS417_00065
Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X |
|---|---|---|---|---|---|
| remove | |||||
| 15,309 | - | +0.0 | |||
| 15,375 | + | -1.2 | |||
| 15,412 | + | -1.4 | |||
| 15,412 | + | -0.2 | |||
| 15,412 | + | -0.8 | |||
| 15,421 | + | +1.0 | |||
| 15,422 | - | +0.4 | |||
| 15,524 | + | PS417_00065 | 0.27 | +0.8 | |
| 15,767 | + | PS417_00065 | 0.70 | -0.6 | |
| 16,856 | + | -0.0 | |||
| 16,924 | + | -0.8 | |||
| 16,924 | + | +0.2 | |||
| 16,925 | - | -1.0 |
Or see this region's nucleotide sequence