Strain Fitness in Escherichia coli BW25113 around b2431
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,546,674 | + | b2430 | b2430 | 0.42 | +0.2 |
2,546,758 | + | b2430 | b2430 | 0.49 | +0.2 |
2,546,844 | + | b2430 | b2430 | 0.55 | +0.0 |
2,546,969 | - | b2430 | b2430 | 0.65 | +1.4 |
2,546,969 | - | b2430 | b2430 | 0.65 | +0.3 |
2,547,030 | + | b2430 | b2430 | 0.69 | -0.5 |
2,547,062 | - | b2430 | b2430 | 0.72 | +0.0 |
2,547,062 | - | b2430 | b2430 | 0.72 | +0.4 |
2,547,071 | - | b2430 | b2430 | 0.73 | +0.3 |
2,547,087 | - | b2430 | b2430 | 0.74 | -0.5 |
2,547,141 | - | b2430 | b2430 | 0.78 | -0.1 |
2,547,319 | - | +0.9 | |||
2,547,338 | - | +0.1 | |||
2,547,495 | + | -0.0 | |||
2,547,495 | + | +0.9 | |||
2,547,774 | + | b2431 | b2431 | 0.12 | -1.1 |
2,547,790 | + | b2431 | b2431 | 0.14 | -2.8 |
2,547,798 | - | b2431 | b2431 | 0.14 | -2.5 |
2,547,813 | + | b2431 | b2431 | 0.16 | -1.7 |
2,547,824 | + | b2431 | b2431 | 0.17 | -3.3 |
2,547,827 | - | b2431 | b2431 | 0.18 | -2.5 |
2,547,830 | - | b2431 | b2431 | 0.18 | -2.5 |
2,547,834 | + | b2431 | b2431 | 0.18 | -2.5 |
2,547,929 | - | -0.1 | |||
2,547,929 | - | b2431 | b2431 | 0.29 | -1.7 |
2,547,937 | - | b2431 | b2431 | 0.30 | -0.1 |
2,547,937 | - | b2431 | b2431 | 0.30 | -2.0 |
2,547,991 | + | b2431 | b2431 | 0.36 | -1.1 |
2,547,999 | - | b2431 | b2431 | 0.37 | -1.6 |
2,548,032 | - | b2431 | b2431 | 0.40 | -2.7 |
2,548,032 | - | b2431 | b2431 | 0.40 | -1.5 |
2,548,044 | - | b2431 | b2431 | 0.42 | -0.1 |
2,548,054 | + | b2431 | b2431 | 0.43 | -1.7 |
2,548,054 | + | b2431 | b2431 | 0.43 | -0.1 |
2,548,072 | + | b2431 | b2431 | 0.45 | -3.0 |
2,548,163 | + | b2431 | b2431 | 0.55 | -2.0 |
2,548,201 | + | b2431 | b2431 | 0.59 | -2.8 |
2,548,203 | + | b2431 | b2431 | 0.59 | -1.7 |
2,548,229 | - | b2431 | b2431 | 0.62 | -2.0 |
2,548,322 | - | b2431 | b2431 | 0.73 | -2.3 |
2,548,537 | - | -0.1 | |||
2,548,537 | - | -2.1 | |||
2,548,895 | + | yfeY | b2432 | 0.40 | -1.5 |
2,549,078 | + | yfeY | b2432 | 0.72 | -1.0 |
2,549,078 | + | yfeY | b2432 | 0.72 | +0.1 |
2,549,210 | + | -2.1 | |||
2,549,253 | - | +0.6 | |||
2,549,266 | - | -0.2 | |||
2,549,348 | + | b2433 | b2433 | 0.11 | +0.4 |
2,549,388 | + | b2433 | b2433 | 0.20 | +0.7 |
Or see this region's nucleotide sequence