Strain Fitness in Escherichia coli BW25113 around b1846
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,926,172 | + | ptrB | b1845 | 0.66 | -0.4 |
1,926,172 | + | ptrB | b1845 | 0.66 | +0.6 |
1,926,326 | - | ptrB | b1845 | 0.74 | -0.7 |
1,926,403 | - | ptrB | b1845 | 0.78 | +0.2 |
1,926,489 | - | ptrB | b1845 | 0.82 | +0.2 |
1,926,492 | + | ptrB | b1845 | 0.82 | -0.2 |
1,926,492 | + | ptrB | b1845 | 0.82 | -1.2 |
1,926,531 | + | ptrB | b1845 | 0.84 | +1.4 |
1,926,554 | - | ptrB | b1845 | 0.85 | -0.1 |
1,926,554 | - | ptrB | b1845 | 0.85 | +0.1 |
1,926,593 | + | ptrB | b1845 | 0.87 | -0.2 |
1,926,750 | + | +0.1 | |||
1,926,750 | + | -0.4 | |||
1,927,234 | + | yebE | b1846 | 0.25 | -0.4 |
1,927,234 | + | yebE | b1846 | 0.25 | -0.7 |
1,927,267 | + | yebE | b1846 | 0.30 | -1.1 |
1,927,334 | - | yebE | b1846 | 0.40 | -0.4 |
1,927,382 | - | yebE | b1846 | 0.47 | -0.4 |
1,927,382 | - | yebE | b1846 | 0.47 | -1.4 |
1,927,407 | + | yebE | b1846 | 0.51 | +0.3 |
1,927,533 | + | yebE | b1846 | 0.70 | -0.5 |
1,927,578 | + | yebE | b1846 | 0.77 | -2.0 |
1,927,767 | - | -0.4 | |||
1,927,861 | + | +0.5 | |||
1,927,896 | + | -1.4 | |||
1,928,014 | - | -0.4 | |||
1,928,054 | + | -1.4 | |||
1,928,054 | + | +1.9 | |||
1,928,324 | + | yebF | b1847 | 0.75 | -0.7 |
1,928,324 | + | yebF | b1847 | 0.75 | -2.4 |
1,928,426 | + | -1.4 | |||
1,928,426 | + | +0.8 | |||
1,928,449 | - | +0.2 | |||
1,928,449 | - | +0.6 |
Or see this region's nucleotide sequence