Strain Fitness in Escherichia coli BW25113 around b1503
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,584,838 | - | -0.6 | |||
1,584,993 | - | ydeQ | b1502 | 0.16 | -0.6 |
1,585,024 | - | ydeQ | b1502 | 0.20 | -0.6 |
1,585,026 | - | ydeQ | b1502 | 0.20 | -0.6 |
1,585,054 | - | ydeQ | b1502 | 0.23 | -1.2 |
1,585,490 | - | ydeQ | b1502 | 0.71 | -0.6 |
1,585,490 | - | ydeQ | b1502 | 0.71 | -0.6 |
1,585,490 | - | ydeQ | b1502 | 0.71 | -0.6 |
1,585,490 | - | ydeQ | b1502 | 0.71 | -1.6 |
1,585,872 | - | ydeR | b1503 | 0.11 | -2.2 |
1,585,981 | - | ydeR | b1503 | 0.33 | -1.6 |
1,586,062 | - | ydeR | b1503 | 0.49 | +0.4 |
1,586,062 | - | ydeR | b1503 | 0.49 | -1.6 |
1,586,105 | - | ydeR | b1503 | 0.57 | -1.6 |
1,586,172 | + | ydeR | b1503 | 0.70 | -0.6 |
1,586,187 | + | ydeR | b1503 | 0.73 | -0.6 |
1,586,200 | - | ydeR | b1503 | 0.76 | -0.6 |
1,586,200 | - | ydeR | b1503 | 0.76 | -0.6 |
1,586,210 | - | ydeR | b1503 | 0.78 | -0.6 |
1,586,217 | - | ydeR | b1503 | 0.79 | +0.4 |
1,586,239 | - | ydeR | b1503 | 0.84 | +1.0 |
1,586,245 | - | ydeR | b1503 | 0.85 | +0.4 |
1,586,252 | + | ydeR | b1503 | 0.86 | -1.6 |
1,586,260 | - | ydeR | b1503 | 0.88 | -0.6 |
1,586,364 | + | +0.4 | |||
1,586,372 | - | +0.4 | |||
1,586,408 | - | ydeS | b1504 | 0.14 | -1.6 |
1,586,415 | + | ydeS | b1504 | 0.15 | +0.9 |
1,586,415 | + | ydeS | b1504 | 0.15 | -0.6 |
1,586,415 | + | ydeS | b1504 | 0.15 | +0.1 |
1,586,415 | + | ydeS | b1504 | 0.15 | +0.0 |
1,586,415 | + | ydeS | b1504 | 0.15 | +0.4 |
1,586,458 | + | ydeS | b1504 | 0.24 | +0.2 |
1,586,589 | + | ydeS | b1504 | 0.48 | -0.6 |
1,586,659 | + | ydeS | b1504 | 0.61 | -0.6 |
1,586,748 | + | ydeS | b1504 | 0.78 | -0.6 |
1,586,914 | - | -0.6 | |||
1,587,007 | - | ydeT | b1505 | 0.11 | -0.6 |
1,587,161 | - | ydeT | b1505 | 0.23 | -2.6 |
1,587,206 | - | ydeT | b1505 | 0.27 | -0.6 |
Or see this region's nucleotide sequence