Strain Fitness in Escherichia coli BW25113 around b1164
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,214,067 | + | ycgF | b1163 | 0.48 | -2.4 |
1,214,067 | + | ycgF | b1163 | 0.48 | +0.2 |
1,214,151 | - | ycgF | b1163 | 0.55 | -1.9 |
1,214,190 | + | ycgF | b1163 | 0.58 | -0.4 |
1,214,190 | + | ycgF | b1163 | 0.58 | -0.4 |
1,214,194 | - | ycgF | b1163 | 0.58 | -0.4 |
1,214,203 | + | ycgF | b1163 | 0.59 | -0.8 |
1,214,203 | + | ycgF | b1163 | 0.59 | -0.4 |
1,214,203 | + | ycgF | b1163 | 0.59 | -0.4 |
1,214,257 | + | ycgF | b1163 | 0.64 | -0.4 |
1,214,366 | + | ycgF | b1163 | 0.73 | +0.6 |
1,214,460 | + | ycgF | b1163 | 0.80 | +1.2 |
1,214,460 | - | ycgF | b1163 | 0.80 | -0.4 |
1,214,478 | + | ycgF | b1163 | 0.82 | -0.4 |
1,214,541 | - | ycgF | b1163 | 0.87 | -0.8 |
1,214,575 | + | ycgF | b1163 | 0.90 | -0.4 |
1,214,590 | - | -0.9 | |||
1,214,596 | - | +2.0 | |||
1,214,612 | - | +1.2 | |||
1,214,614 | + | -0.4 | |||
1,214,614 | + | -0.4 | |||
1,214,617 | - | +0.5 | |||
1,214,718 | - | -0.4 | |||
1,214,718 | - | +2.1 | |||
1,214,730 | - | +0.6 | |||
1,214,730 | - | -0.4 | |||
1,214,730 | - | -0.4 | |||
1,214,789 | + | -0.4 | |||
1,215,133 | + | ycgZ | b1164 | 0.51 | -0.4 |
1,215,188 | + | ycgZ | b1164 | 0.74 | +0.6 |
1,215,190 | + | ycgZ | b1164 | 0.75 | -1.9 |
1,215,288 | + | -0.4 | |||
1,215,346 | + | ymgA | b1165 | 0.20 | -0.4 |
1,215,347 | + | ymgA | b1165 | 0.21 | -0.4 |
1,215,349 | + | ymgA | b1165 | 0.21 | -0.4 |
1,216,034 | + | ymgC | b1167 | 0.25 | -0.4 |
1,216,162 | + | ymgC | b1167 | 0.77 | -0.4 |
1,216,213 | + | -0.4 | |||
1,216,243 | + | -0.4 |
Or see this region's nucleotide sequence