Strain Fitness in Agrobacterium fabrum C58 around Atu5106

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
111,408	-		Atu5104	0.35	-0.0
111,425	-		Atu5104	0.38	-0.1
111,450	-		Atu5104	0.42	-0.2
111,481	+		Atu5104	0.48	+0.5
111,508	-		Atu5104	0.53	+0.2
111,510	+		Atu5104	0.53	+0.9
111,518	-		Atu5104	0.55	+0.2
111,534	+		Atu5104	0.58	-0.7
111,566	+		Atu5104	0.64	-0.3
111,698	-		Atu5104	0.88	+0.1
111,723	+				+0.3
111,769	+				+0.3
111,770	-				-0.6
111,803	-				-0.2
111,806	+				-2.7
111,867	+		Atu5105	0.24	-0.1
111,872	+		Atu5105	0.25	-0.1
111,880	-		Atu5105	0.26	-0.0
111,885	-		Atu5105	0.28	+0.1
112,067	+		Atu5105	0.69	+0.1
112,081	-		Atu5105	0.72	-0.9
112,084	-		Atu5105	0.73	+0.0
112,143	-		Atu5105	0.87	-0.4
112,157	-		Atu5105	0.90	-0.8
112,184	-				-1.2
112,216	+				-0.3
112,304	+				-0.6
112,363	+				+1.5
112,501	+		Atu5106	0.46	-0.1
112,517	-		Atu5106	0.53	+1.0
112,559	-		Atu5106	0.71	-0.1
112,702	-				-0.1
112,780	-		Atu5107	0.24	-1.5
112,858	-		Atu5107	0.49	-0.6
112,891	+		Atu5107	0.59	+0.4
112,982	-		Atu5107	0.88	+0.2
113,018	-				+0.5
113,074	-				+0.0
113,130	-				-0.6
113,155	+				-0.5
113,183	+				-1.3
113,188	+				+0.9
113,199	-				+0.1
113,294	+				-0.6
113,369	+				+0.1
113,374	+				+1.1
113,383	-				+0.1
113,383	-				+0.2
113,426	+				+0.5
113,476	+				-0.3
113,479	-				-0.3
113,493	+				-0.2