Strain Fitness in Agrobacterium fabrum C58 around Atu3775

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
858,523	+		Atu3775	0.10	-0.9
858,531	-		Atu3775	0.12	+1.2
858,662	-		Atu3775	0.48	+0.4
859,016	+		Atu3776	0.34	+0.0
859,077	+		Atu3776	0.50	-1.1
859,078	-		Atu3776	0.50	-0.7
859,078	-		Atu3776	0.50	-0.3
859,112	-		Atu3776	0.59	+0.3
859,373	-				+0.2
859,400	-				+0.3
859,465	+		Atu3777	0.13	-0.3
859,468	+		Atu3777	0.13	+0.2
859,476	-		Atu3777	0.14	-0.6
859,478	+		Atu3777	0.14	-0.1
859,500	+		Atu3777	0.15	-0.2
859,525	-		Atu3777	0.17	-0.6
859,651	+		Atu3777	0.25	-0.2
859,774	-		Atu3777	0.34	+1.8