Strain Fitness in Agrobacterium fabrum C58 around Atu3598

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
651,530	+				-0.5
651,589	-		Atu3597	0.11	-0.2
651,663	+		Atu3597	0.20	-0.6
651,696	+		Atu3597	0.23	-0.4
651,753	-		Atu3597	0.30	-0.2
651,805	+		Atu3597	0.36	-0.3
651,805	+		Atu3597	0.36	+0.2
651,813	-		Atu3597	0.37	-0.3
651,901	+		Atu3597	0.46	-1.0
652,069	-		Atu3597	0.66	-0.7
652,108	+		Atu3597	0.70	+0.2
652,108	+		Atu3597	0.70	-0.2
652,108	+		Atu3597	0.70	-1.6
652,116	-		Atu3597	0.71	+0.0
652,116	-		Atu3597	0.71	+0.2
652,272	+		Atu3597	0.89	+0.0
652,272	+		Atu3597	0.89	-0.2
652,439	+				-0.2
652,472	-				-1.4
652,472	-				-0.2
652,525	-		Atu3598	0.16	+0.9
652,811	-		Atu3598	0.59	+0.3
652,954	-		Atu3598	0.80	+0.6