Strain Fitness in Agrobacterium fabrum C58 around Atu3015

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
9,018	+		Atu3013	0.19	+1.8
9,102	+		Atu3013	0.40	+1.4
9,125	-		Atu3013	0.46	+1.6
9,147	+		Atu3013	0.51	+0.6
9,195	+		Atu3013	0.63	+1.5
9,258	-		Atu3013	0.79	+1.2
9,331	-				+1.8
9,363	+				+1.5
9,457	-		Atu3014	0.44	+1.8
9,509	-		Atu3014	0.64	+1.5
9,695	-				+0.2
9,732	+				+1.7
9,768	-				+2.0
9,927	+				+1.4
9,959	-				+1.9
10,079	+		Atu3015	0.15	+1.9
10,090	+		Atu3015	0.17	+1.5
10,101	+		Atu3015	0.19	+0.8
10,130	-		Atu3015	0.24	+1.5
10,135	-		Atu3015	0.25	+0.8
10,296	+		Atu3015	0.54	+1.7
10,318	+		Atu3015	0.58	+1.4
10,323	+		Atu3015	0.59	+1.9
10,326	-		Atu3015	0.59	+1.7
10,355	+		Atu3015	0.65	+1.5
10,403	-		Atu3015	0.73	+1.6
10,443	+		Atu3015	0.81	+1.0
10,445	+		Atu3015	0.81	+1.0
10,602	+				+1.4
10,611	+				+1.1
10,631	+		Atu3016	0.14	+1.5
10,649	-		Atu3016	0.20	+1.7
10,682	-		Atu3016	0.31	+1.3
10,689	+		Atu3016	0.33	+1.4
10,697	-		Atu3016	0.36	+1.5
10,774	+		Atu3016	0.62	+1.6
10,787	-		Atu3016	0.66	+1.6
10,794	+		Atu3016	0.68	+1.4
10,800	+		Atu3016	0.70	+1.7
10,862	-				+1.7
11,146	+		Atu3017	0.89	+1.1
11,166	+				+1.4
11,166	+				+1.9
11,178	+				+1.7
11,241	-				+0.8
11,289	+		Atu3018	0.10	+1.3
11,303	+		Atu3018	0.14	+1.2
11,303	+		Atu3018	0.14	+1.6
11,314	+		Atu3018	0.17	-1.7
11,332	+		Atu3018	0.22	+1.5
11,398	-		Atu3018	0.39	+0.9
11,539	-		Atu3018	0.76	+1.6