Strain Fitness in Agrobacterium fabrum C58 around Atu2793

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
2,794,079	-		Atu2792	0.45	+0.0
2,794,238	+		Atu2792	0.59	-0.3
2,794,450	-		Atu2792	0.78	-0.5
2,794,560	+		Atu2792	0.88	-0.3
2,794,571	+		Atu2792	0.89	-0.7
2,794,574	-		Atu2792	0.89	-0.1
2,794,598	-				-0.2
2,794,943	-				-1.0
2,795,220	-		Atu2793	0.14	+1.7
2,795,381	+		Atu2793	0.26	-0.3
2,795,412	+		Atu2793	0.29	+1.4
2,795,489	-		Atu2793	0.34	-2.3
2,795,578	-		Atu2793	0.41	+1.2
2,795,589	-		Atu2793	0.42	+0.8
2,795,661	-		Atu2793	0.48	+0.3
2,795,732	+		Atu2793	0.53	-0.6
2,795,754	-		Atu2793	0.55	+0.2
2,795,778	+		Atu2793	0.56	+1.1
2,795,780	-		Atu2793	0.57	-0.8
2,796,166	-		Atu2793	0.86	+0.4
2,796,218	+		Atu2793	0.90	+0.2
2,796,249	+				+0.2
2,796,249	+				+0.6
2,796,289	+				-0.3
2,796,347	+				+0.2
2,796,362	+				+0.4
2,796,537	-		Atu2794	0.24	+1.3
2,796,537	-		Atu2794	0.24	-0.0
2,796,630	+		Atu2794	0.36	+0.2
2,797,008	-		Atu2794	0.84	-0.7
2,797,066	+				-0.3
2,797,066	+				-0.2
2,797,208	+				-0.5