Strain Fitness in Agrobacterium fabrum C58 around Atu2384

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
2,353,453	+		Atu2381	0.76	-1.4
2,353,474	-		Atu2381	0.82	-0.0
2,353,494	+		Atu2381	0.87	-0.9
2,353,545	-				+0.8
2,353,594	-		Atu2382	0.16	-0.1
2,353,616	+		Atu2382	0.24	-1.6
2,353,735	+		Atu2382	0.65	-0.0
2,353,743	-		Atu2382	0.67	-0.2
2,353,781	+		Atu2382	0.80	-0.9
2,353,874	+		Atu2383	0.13	-0.3
2,354,112	-		Atu2383	0.69	+0.3
2,354,191	+		Atu2383	0.88	+0.1
2,354,191	+		Atu2383	0.88	+1.3
2,354,191	+		Atu2383	0.88	-0.0
2,354,191	+		Atu2383	0.88	+0.3
2,354,191	+		Atu2383	0.88	-0.2
2,354,191	+		Atu2383	0.88	+0.4
2,354,191	+		Atu2383	0.88	+0.5
2,354,191	+		Atu2383	0.88	-0.1
2,354,191	+		Atu2383	0.88	+0.8
2,354,191	+		Atu2383	0.88	-0.3
2,354,191	+		Atu2383	0.88	+0.9
2,354,191	+		Atu2383	0.88	-1.0
2,354,199	-		Atu2383	0.89	-0.2
2,354,199	-		Atu2383	0.89	+0.5
2,354,199	-		Atu2383	0.89	-0.2
2,354,199	-		Atu2383	0.89	-0.4
2,354,199	-		Atu2383	0.89	-0.3
2,354,199	-		Atu2383	0.89	-0.5
2,354,199	-		Atu2383	0.89	-0.3
2,354,199	-		Atu2383	0.89	+1.0
2,354,199	-		Atu2383	0.89	-0.1
2,354,495	-		Atu2384	0.14	+0.9
2,354,539	-		Atu2384	0.21	-0.5
2,354,595	+		Atu2384	0.30	-0.2
2,354,849	+		Atu2384	0.69	-0.2
2,354,961	-		Atu2384	0.87	-0.4
2,354,963	+		Atu2384	0.87	+0.0
2,355,014	+				-0.3
2,355,022	-				-0.1
2,355,042	+				-0.2
2,355,063	-				-0.2
2,355,265	-				+0.0
2,355,295	+				-0.2
2,355,356	+				-1.1
2,355,356	+				+1.7
2,355,366	-				-0.3
2,355,437	+				+0.7
2,355,437	+				-0.0
2,355,447	+				-0.0
2,355,447	+				-1.5
2,355,447	+				+1.2
2,355,503	-		Atu2385	0.14	-0.3
2,355,668	+		Atu2385	0.28	-0.1
2,355,671	+		Atu2385	0.28	+0.2
2,355,679	-		Atu2385	0.29	-0.1
2,355,694	+		Atu2385	0.30	-0.2
2,355,778	-		Atu2385	0.37	+0.2
2,355,836	+		Atu2385	0.42	+0.6
2,355,862	+		Atu2385	0.44	+0.2
2,355,951	-		Atu2385	0.51	-0.7
2,355,957	-		Atu2385	0.51	-0.4
2,355,957	-		Atu2385	0.51	-0.9