Strain Fitness in Agrobacterium fabrum C58 around Atu1952

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
1,920,691	+				-0.3
1,920,709	-				+0.3
1,920,714	-				+0.2
1,920,716	+				+0.3
1,920,942	-		Atu1952	0.31	+0.4
1,921,108	+		Atu1952	0.87	+1.2
1,921,160	-				-0.4
1,921,162	+				-1.2
1,921,192	+		Atu1953	0.10	-0.0
1,921,200	-		Atu1953	0.12	+1.3
1,921,200	-		Atu1953	0.12	+0.7
1,921,215	-		Atu1953	0.17	-0.5
1,921,240	+		Atu1953	0.24	+0.1
1,921,327	+		Atu1953	0.48	+0.1
1,921,327	+		Atu1953	0.48	-0.2
1,921,330	-		Atu1953	0.49	+0.1
1,921,332	+		Atu1953	0.50	+0.8
1,921,393	+		Atu1953	0.67	+0.8
1,921,417	-		Atu1953	0.74	-2.1
1,921,424	+		Atu1953	0.76	-0.3
1,921,593	-				+0.2
1,921,736	-		Atu1954	0.12	+0.3
1,921,943	+		Atu1954	0.31	-0.5
1,921,955	-		Atu1954	0.32	-0.9
1,922,123	-		Atu1954	0.48	-0.5
1,922,137	-		Atu1954	0.49	-0.0