Strain Fitness in Agrobacterium fabrum C58 around Atu1470

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
1,464,329	+		Atu1468	0.83	-0.4
1,464,436	+				+0.1
1,464,464	+				+0.9
1,464,548	+				+0.6
1,464,872	-		Atu1469	0.48	+0.5
1,464,937	-		Atu1469	0.68	+0.6
1,464,962	-		Atu1469	0.76	-0.2
1,465,199	+				-0.4
1,465,424	+		Atu1470	0.49	+0.6
1,465,492	+		Atu1470	0.67	+0.1
1,465,600	-				-0.5
1,465,625	-				+1.9
1,465,637	+				+0.6
1,465,637	+				-0.1
1,465,699	+				-0.4
1,465,699	+				-0.4
1,465,836	-		Atu1471	0.16	-0.8