Strain Fitness in Agrobacterium fabrum C58 around Atu1125

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
1,114,065	-		Atu1123	0.25	+0.1
1,114,144	+		Atu1123	0.40	-0.4
1,114,171	+		Atu1123	0.46	+0.3
1,114,224	+		Atu1123	0.56	-0.1
1,114,279	+		Atu1123	0.67	+0.2
1,114,368	-		Atu1123	0.84	+0.9
1,114,427	+				-0.5
1,114,435	-				-0.8
1,114,435	-				+0.3
1,114,450	-				-0.2
1,114,539	-		Atu1124	0.17	-0.4
1,114,656	+		Atu1124	0.38	-0.2
1,114,686	+		Atu1124	0.43	-0.1
1,114,741	+		Atu1124	0.53	+0.4
1,114,841	-		Atu1124	0.72	-0.3
1,114,963	-				+0.1
1,115,310	+		Atu1125	0.28	-0.5
1,115,348	+		Atu1125	0.32	+0.6
1,115,641	-		Atu1125	0.65	+1.0
1,115,666	+		Atu1125	0.68	+0.5
1,115,674	-		Atu1125	0.69	+0.1
1,115,810	+		Atu1125	0.84	+0.5
1,116,027	-				-0.1
1,116,076	+		Atu1126	0.15	-0.4
1,116,110	+		Atu1126	0.22	-0.1
1,116,175	+		Atu1126	0.36	-0.9
1,116,230	-		Atu1126	0.48	-0.6
1,116,243	+		Atu1126	0.50	+0.0
1,116,307	+		Atu1126	0.64	-0.1
1,116,333	-		Atu1126	0.70	-1.3
1,116,587	+		Atu1127	0.42	-0.1
1,116,595	-		Atu1127	0.45	-0.8