Strain Fitness in Agrobacterium fabrum C58 around Atu0883

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
877,125	+		Atu0882	0.53	-1.1
877,158	-		Atu0882	0.56	-0.5
877,197	-		Atu0882	0.60	-0.3
877,480	+				+1.0
877,481	-				-0.6
877,506	-				-0.2
877,563	-				-0.3
877,596	+				-0.3
877,609	-				+0.1
877,668	+				+0.3
877,668	+				-0.7
877,678	+				+1.8
877,772	+				+0.2
877,772	+				-0.0
877,872	-				+0.5
877,874	-				-0.5
877,924	-				+0.1
877,991	+				-1.2
878,124	-		Atu0883	0.59	-0.1
878,135	+		Atu0883	0.65	-1.5
878,143	-		Atu0883	0.69	-1.8
878,413	-		Atu0884	0.29	+0.7
878,417	+		Atu0884	0.29	+1.3
878,543	-		Atu0884	0.47	+0.3
878,717	+		Atu0884	0.71	+0.1
878,724	-		Atu0884	0.72	-0.0
878,740	+		Atu0884	0.75	-0.2
878,748	-		Atu0884	0.76	-0.0
879,067	+		Atu0885	0.45	+0.1
879,094	+		Atu0885	0.54	-0.4
879,158	-		Atu0885	0.74	-0.3