Strain Fitness in Agrobacterium fabrum C58 around Atu0687

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
683,935	+				+0.5
684,162	-		Atu0687	0.39	+0.4
684,180	-		Atu0687	0.42	+1.1
684,352	+		Atu0687	0.69	+0.3
684,588	-				+0.0
685,075	+				+1.0
685,106	-				-0.5
685,116	-				-0.5
685,242	+				-0.4
685,250	-				-0.7
685,359	-		Atu0689	0.11	+0.5
685,482	+		Atu0689	0.17	-0.4