Strain Fitness in Agrobacterium fabrum C58 around Atu0640

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
627,287	+				+0.2
627,305	+		Atu0640	0.13	-0.2
627,326	-		Atu0640	0.20	-0.3
627,331	-		Atu0640	0.21	+2.1
627,576	+				+0.3
627,623	-				-0.1
627,675	-				-0.1
627,681	-				+0.2
627,712	+				-0.8
627,720	-				-0.1
627,854	+		Atu0641	0.14	-3.0
628,351	+				-0.4
628,361	+				-2.3
628,361	+				-1.0