Strain Fitness in Agrobacterium fabrum C58 around Atu0369

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
362,327	+				-0.7
362,330	-				+0.7
362,569	+		Atu0368	0.29	+0.1
362,569	+		Atu0368	0.29	+0.1
362,609	-		Atu0368	0.34	+0.5
362,609	-		Atu0368	0.34	-1.9
362,609	-		Atu0368	0.34	-1.7
362,609	-		Atu0368	0.34	+0.4
362,659	+		Atu0368	0.40	-0.5
362,774	-		Atu0368	0.54	-0.3
362,819	-		Atu0368	0.60	+0.0
362,829	-		Atu0368	0.61	-0.1
362,861	+		Atu0368	0.65	-0.6
362,931	+		Atu0368	0.74	-0.7
362,951	+		Atu0368	0.77	+0.8
362,975	+		Atu0368	0.80	+1.7
363,137	+				+0.1
363,145	-				+0.5
363,233	-		Atu0369	0.13	+0.3
363,430	-		Atu0369	0.46	+2.8
363,459	+		Atu0369	0.50	-0.0
363,560	-		Atu0369	0.67	+1.1
363,567	-		Atu0369	0.69	+0.3
363,613	-		Atu0369	0.76	-1.1
363,663	+		Atu0369	0.85	+1.3
363,730	+				-0.1
363,730	+				-1.7