Strain Fitness in Agrobacterium fabrum C58 around Atu3036

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
29,053	-		Atu3035	0.67	-0.5
29,100	-		Atu3035	0.69	+0.1
29,100	-		Atu3035	0.69	-0.1
29,212	+		Atu3035	0.74	+0.5
29,298	-		Atu3035	0.78	+0.9
29,375	+		Atu3035	0.81	+0.5
29,435	+		Atu3035	0.84	+0.6
29,618	-				+0.9
29,676	+				+0.5
29,678	+				+0.6
29,762	+				+0.5
29,762	+				+1.2
29,772	-				+0.3
29,896	-				+0.5
30,091	+				-0.0
30,358	+		Atu3036	0.31	+0.4
30,358	+		Atu3036	0.31	+0.1
30,358	+		Atu3036	0.31	+0.7
30,596	-		Atu3036	0.54	+0.2
30,758	-		Atu3036	0.70	+1.0
30,938	-		Atu3036	0.87	+0.2
30,946	+		Atu3036	0.88	+0.3
31,006	+				+0.5
31,099	-				+0.5
31,104	-				+0.3
31,131	-				+1.0
31,231	-		Atu3037	0.19	-0.1
31,342	-		Atu3037	0.31	+0.8
31,379	+		Atu3037	0.35	+0.3
31,402	+		Atu3037	0.38	+0.3
31,405	-		Atu3037	0.38	+0.4
31,587	+		Atu3037	0.59	+1.3
31,669	+		Atu3037	0.68	+0.4
31,718	-		Atu3037	0.74	-0.0
31,718	-		Atu3037	0.74	+0.3
31,718	-		Atu3037	0.74	+0.3
31,764	-		Atu3037	0.79	+0.5
31,793	+		Atu3037	0.82	-0.1
31,800	-		Atu3037	0.83	-0.0
31,801	-		Atu3037	0.83	+0.3
31,857	+		Atu3037	0.90	+0.3
31,862	+				+0.1
31,865	-				+0.6
31,870	-				+0.4
31,873	+				-0.3
31,873	+				-0.5
31,895	+				+1.0
31,956	-				-0.4
31,961	-				+0.4
32,008	-				-0.0
32,021	+				+0.5
32,029	-				+0.1