Strain Fitness in Agrobacterium fabrum C58 around Atu3014

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
8,465	-		Atu3012	0.54	+2.1
8,682	+		Atu3012	0.85	-0.4
8,730	+				+0.4
8,769	-				+1.5
9,018	+		Atu3013	0.19	+1.5
9,102	+		Atu3013	0.40	+1.1
9,125	-		Atu3013	0.46	+1.5
9,147	+		Atu3013	0.51	+0.8
9,195	+		Atu3013	0.63	+0.8
9,258	-		Atu3013	0.79	+0.9
9,331	-				+1.4
9,363	+				+0.8
9,457	-		Atu3014	0.44	+1.4
9,509	-		Atu3014	0.64	+1.3
9,695	-				+0.1
9,732	+				+1.3
9,768	-				+1.5
9,927	+				+0.8
9,959	-				+1.6
10,079	+		Atu3015	0.15	+1.9
10,090	+		Atu3015	0.17	+1.2
10,101	+		Atu3015	0.19	+0.6
10,130	-		Atu3015	0.24	+1.5
10,135	-		Atu3015	0.25	+1.1
10,296	+		Atu3015	0.54	+0.5
10,318	+		Atu3015	0.58	+1.1
10,323	+		Atu3015	0.59	+1.7
10,326	-		Atu3015	0.59	+1.6
10,355	+		Atu3015	0.65	+0.9
10,403	-		Atu3015	0.73	+1.2
10,443	+		Atu3015	0.81	+0.6
10,445	+		Atu3015	0.81	+1.1
10,602	+				+1.0