Strain Fitness in Agrobacterium fabrum C58 around Atu3008

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
4,187	-		Atu3006	0.56	+2.3
4,217	-		Atu3006	0.58	+1.7
4,263	+		Atu3006	0.61	+1.4
4,282	-		Atu3006	0.63	+2.2
4,373	+		Atu3006	0.69	+1.8
4,757	-				+2.1
4,789	-				+2.5
4,935	-		Atu3007	0.41	+2.6
5,166	-				+1.8
5,338	-		Atu3008	0.82	+1.7
5,535	-				+1.8
5,738	+		Atu3009	0.21	+1.0
5,885	-		Atu3009	0.35	+1.7