Strain Fitness in Agrobacterium fabrum C58 around Atu2620

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
2,602,999	-				+1.1
2,603,006	+				+0.2
2,603,121	-				+0.4
2,603,143	-				-0.7
2,603,186	-		Atu2619	0.12	-0.0
2,603,242	+		Atu2619	0.19	+1.7
2,603,242	+		Atu2619	0.19	+1.1
2,603,293	-		Atu2619	0.25	+0.1
2,603,372	+		Atu2619	0.35	+0.3
2,603,380	-		Atu2619	0.36	+0.4
2,603,401	-		Atu2619	0.38	-0.1
2,603,415	-		Atu2619	0.40	+0.1
2,603,449	+		Atu2619	0.44	-0.0
2,603,587	-		Atu2619	0.61	-0.1
2,603,624	+		Atu2619	0.66	-0.0
2,603,642	+		Atu2619	0.68	-0.3
2,603,642	+		Atu2619	0.68	-0.3
2,603,660	-		Atu2619	0.70	+0.4
2,603,674	+		Atu2619	0.72	-0.3
2,603,758	-		Atu2619	0.82	+0.5
2,603,758	-		Atu2619	0.82	+0.6
2,603,876	-				-0.4
2,603,945	-				-0.1
2,603,972	-				+0.1
2,604,022	+		Atu2620	0.25	-0.4
2,604,153	+				+0.2