Strain Fitness in Agrobacterium fabrum C58 around Atu2334

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
2,311,315	-		Atu2333	0.46	+1.2
2,311,589	+		Atu2333	0.65	-0.1
2,311,804	+		Atu2333	0.79	+0.6
2,311,813	-		Atu2333	0.79	-0.2
2,311,895	+		Atu2333	0.85	-0.1
2,311,903	-		Atu2333	0.85	+0.1
2,311,948	-		Atu2333	0.88	+0.6
2,311,974	-				-0.2
2,311,974	-				-0.2
2,311,980	-				-0.2
2,311,998	+				-0.2
2,312,020	+				-0.9
2,312,131	-				-0.2
2,312,131	-				-0.0
2,312,137	-				-0.1
2,312,150	+				-0.1
2,312,175	-				+0.3
2,312,217	-				+0.3
2,312,217	-				-0.1
2,312,252	+				-0.4
2,312,253	+				-0.0
2,312,253	+				+0.4
2,312,261	-				-0.2
2,312,290	-				-0.1
2,312,290	-				+0.0
2,312,290	-				-1.0
2,312,364	-		Atu2334	0.17	+0.1
2,312,364	-		Atu2334	0.17	+0.0
2,312,371	+		Atu2334	0.17	-0.1
2,312,374	-		Atu2334	0.18	+1.5
2,312,397	-		Atu2334	0.20	+0.6
2,312,493	+		Atu2334	0.31	+0.3
2,312,493	+		Atu2334	0.31	+0.6
2,312,501	-		Atu2334	0.32	+0.6
2,312,501	-		Atu2334	0.32	-0.3
2,312,509	+		Atu2334	0.33	+0.2
2,312,536	-		Atu2334	0.36	+0.4
2,312,536	-		Atu2334	0.36	-0.3
2,312,541	-		Atu2334	0.36	+0.2
2,312,573	-		Atu2334	0.40	-0.1
2,312,673	-		Atu2334	0.51	+1.2
2,312,727	+		Atu2334	0.57	+0.8
2,312,790	-		Atu2334	0.63	+0.6
2,312,823	-		Atu2334	0.67	+0.6
2,312,840	+		Atu2334	0.69	-1.2
2,312,840	+		Atu2334	0.69	+0.0
2,312,843	-		Atu2334	0.69	+0.2
2,312,853	-		Atu2334	0.70	+0.3
2,312,855	+		Atu2334	0.71	+1.0
2,312,894	-		Atu2334	0.75	+0.3
2,312,974	-		Atu2334	0.84	+0.6
2,313,052	-				-0.1
2,313,052	-				-0.6
2,313,107	+				-0.5
2,313,115	-				+0.0
2,313,210	+				+0.0
2,313,235	+				+0.2
2,313,235	+				+0.2
2,313,453	-		Atu2335	0.43	-0.3
2,313,455	+		Atu2335	0.43	+0.5
2,313,667	-				-1.1
2,313,674	+				-0.0
2,313,674	+				-1.5
2,313,682	-				+0.2
2,313,682	-				-0.1
2,313,704	+				+0.5
2,313,712	-				-0.0
2,314,034	+		Atu2336	0.19	-0.4
2,314,042	-		Atu2336	0.21	-0.1
2,314,042	-		Atu2336	0.21	-0.2
2,314,091	+		Atu2336	0.28	+0.1