Strain Fitness in Agrobacterium fabrum C58 around Atu1734

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
1,721,385	+		Atu1734	0.26	+0.4
1,721,636	-				+1.4
1,721,731	-		Atu1735	0.10	+0.0
1,721,759	+		Atu1735	0.20	-0.1
1,721,804	-		Atu1735	0.36	+0.0
1,721,862	+		Atu1735	0.56	+2.0
1,721,879	+		Atu1735	0.62	-0.4
1,721,892	-		Atu1735	0.66	-0.2
1,721,954	-		Atu1735	0.88	+0.2
1,722,106	-				+0.0
1,722,363	-		Atu1736	0.27	+0.6
1,722,378	+		Atu1736	0.28	-0.0
1,722,443	+		Atu1736	0.33	+0.5
1,722,550	+		Atu1736	0.40	-0.2
1,722,603	-		Atu1736	0.44	+0.7