Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0816 and Atu0817 overlap by 1 nucleotides Atu0817 and Atu0818 are separated by 28 nucleotides
Atu0816: Atu0816 - sulfate adenylate transferase, subunit 1, at 814,027 to 815,511
Atu0816
Atu0817: Atu0817 - sulfate adenylate transferase, subunit 2, at 815,511 to 816,464
Atu0817
Atu0818: Atu0818 - phosphoadenosine phosphosulfate reductase, at 816,493 to 817,254
Atu0818
Position (kb) 815
816
817 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 814.518 kb on + strand, within Atu0816 at 814.518 kb on + strand, within Atu0816 at 814.526 kb on - strand, within Atu0816 at 814.560 kb on - strand, within Atu0816 at 814.602 kb on - strand, within Atu0816 at 814.638 kb on + strand, within Atu0816 at 814.732 kb on + strand, within Atu0816 at 814.764 kb on - strand, within Atu0816 at 814.766 kb on - strand, within Atu0816 at 814.783 kb on - strand, within Atu0816 at 814.788 kb on - strand, within Atu0816 at 814.793 kb on - strand, within Atu0816 at 814.955 kb on - strand, within Atu0816 at 815.071 kb on - strand, within Atu0816 at 815.075 kb on - strand, within Atu0816 at 815.159 kb on - strand, within Atu0816 at 815.219 kb on + strand, within Atu0816 at 815.263 kb on - strand, within Atu0816 at 815.291 kb on - strand, within Atu0816 at 815.345 kb on - strand, within Atu0816 at 815.354 kb on + strand, within Atu0816 at 815.369 kb on - strand at 815.469 kb on - strand at 815.627 kb on + strand, within Atu0817 at 815.768 kb on + strand, within Atu0817 at 815.770 kb on + strand, within Atu0817 at 815.770 kb on + strand, within Atu0817 at 815.788 kb on + strand, within Atu0817 at 815.788 kb on + strand, within Atu0817 at 815.921 kb on + strand, within Atu0817 at 815.922 kb on - strand, within Atu0817 at 815.979 kb on - strand, within Atu0817 at 815.979 kb on - strand, within Atu0817 at 815.984 kb on - strand, within Atu0817 at 816.002 kb on - strand, within Atu0817 at 816.041 kb on + strand, within Atu0817 at 816.068 kb on + strand, within Atu0817 at 816.087 kb on + strand, within Atu0817 at 816.143 kb on + strand, within Atu0817 at 816.144 kb on - strand, within Atu0817 at 816.144 kb on - strand, within Atu0817 at 816.316 kb on + strand, within Atu0817 at 816.324 kb on - strand, within Atu0817 at 816.427 kb on + strand at 816.432 kb on - strand at 816.444 kb on + strand at 816.454 kb on + strand at 816.462 kb on - strand at 816.462 kb on - strand at 816.462 kb on - strand at 816.591 kb on - strand, within Atu0818 at 816.633 kb on + strand, within Atu0818 at 816.709 kb on + strand, within Atu0818 at 816.712 kb on - strand, within Atu0818 at 816.712 kb on - strand, within Atu0818 at 816.717 kb on - strand, within Atu0818 at 816.752 kb on + strand, within Atu0818 at 816.752 kb on + strand, within Atu0818 at 816.764 kb on + strand, within Atu0818 at 816.764 kb on + strand, within Atu0818 at 816.842 kb on - strand, within Atu0818 at 816.844 kb on + strand, within Atu0818 at 816.852 kb on - strand, within Atu0818 at 816.852 kb on - strand, within Atu0818 at 816.870 kb on + strand, within Atu0818 at 816.912 kb on + strand, within Atu0818 at 816.926 kb on + strand, within Atu0818 at 817.108 kb on - strand, within Atu0818 at 817.132 kb on + strand, within Atu0818 at 817.132 kb on + strand, within Atu0818 at 817.140 kb on - strand, within Atu0818 at 817.185 kb on + strand at 817.200 kb on + strand at 817.203 kb on - strand at 817.287 kb on + strand at 817.340 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) remove 814,518 + Atu0816 0.33 -1.7 814,518 + Atu0816 0.33 -1.3 814,526 - Atu0816 0.34 -0.4 814,560 - Atu0816 0.36 -0.9 814,602 - Atu0816 0.39 -0.1 814,638 + Atu0816 0.41 -0.6 814,732 + Atu0816 0.47 -0.8 814,764 - Atu0816 0.50 -0.6 814,766 - Atu0816 0.50 -0.7 814,783 - Atu0816 0.51 -0.2 814,788 - Atu0816 0.51 -0.4 814,793 - Atu0816 0.52 -0.2 814,955 - Atu0816 0.62 -0.6 815,071 - Atu0816 0.70 -0.2 815,075 - Atu0816 0.71 -0.1 815,159 - Atu0816 0.76 -2.2 815,219 + Atu0816 0.80 +0.1 815,263 - Atu0816 0.83 +0.3 815,291 - Atu0816 0.85 -0.1 815,345 - Atu0816 0.89 +0.4 815,354 + Atu0816 0.89 -0.7 815,369 - -0.1 815,469 - -0.5 815,627 + Atu0817 0.12 -0.4 815,768 + Atu0817 0.27 -0.8 815,770 + Atu0817 0.27 -2.2 815,770 + Atu0817 0.27 -1.0 815,788 + Atu0817 0.29 -0.8 815,788 + Atu0817 0.29 -0.3 815,921 + Atu0817 0.43 -0.5 815,922 - Atu0817 0.43 -0.5 815,979 - Atu0817 0.49 -0.1 815,979 - Atu0817 0.49 +0.1 815,984 - Atu0817 0.50 -0.8 816,002 - Atu0817 0.51 -0.9 816,041 + Atu0817 0.56 -0.8 816,068 + Atu0817 0.58 -0.8 816,087 + Atu0817 0.60 -1.0 816,143 + Atu0817 0.66 -0.3 816,144 - Atu0817 0.66 -0.2 816,144 - Atu0817 0.66 -0.6 816,316 + Atu0817 0.84 +0.0 816,324 - Atu0817 0.85 -0.5 816,427 + -0.7 816,432 - -0.0 816,444 + -0.6 816,454 + +0.4 816,462 - -0.3 816,462 - -0.4 816,462 - -1.0 816,591 - Atu0818 0.13 -4.2 816,633 + Atu0818 0.18 -0.7 816,709 + Atu0818 0.28 -0.4 816,712 - Atu0818 0.29 -0.9 816,712 - Atu0818 0.29 -1.2 816,717 - Atu0818 0.29 -0.8 816,752 + Atu0818 0.34 -0.4 816,752 + Atu0818 0.34 +1.4 816,764 + Atu0818 0.36 -0.4 816,764 + Atu0818 0.36 -1.2 816,842 - Atu0818 0.46 -0.5 816,844 + Atu0818 0.46 -0.3 816,852 - Atu0818 0.47 -0.4 816,852 - Atu0818 0.47 -0.8 816,870 + Atu0818 0.49 -0.7 816,912 + Atu0818 0.55 -0.2 816,926 + Atu0818 0.57 +0.3 817,108 - Atu0818 0.81 -1.0 817,132 + Atu0818 0.84 -0.5 817,132 + Atu0818 0.84 -0.2 817,140 - Atu0818 0.85 +0.3 817,185 + -0.5 817,200 + -1.3 817,203 - -0.2 817,287 + -0.5 817,340 - -1.8
Or see this region's nucleotide sequence