Experiment: Methyl beta-D-glucopyranoside (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0072 and Atu0073 are separated by 28 nucleotides Atu0073 and Atu0074 are separated by 22 nucleotides Atu0074 and Atu0075 are separated by 3 nucleotides
Atu0072: Atu0072 - hypothetical protein, at 74,781 to 76,016
Atu0072
Atu0073: Atu0073 - recF-like protein, at 76,045 to 77,172
Atu0073
Atu0074: Atu0074 - molybdopterin biosynthesis protein, at 77,195 to 77,956
Atu0074
Atu0075: Atu0075 - hypothetical protein, at 77,960 to 78,436
Atu0075
Position (kb) 76
77
78 Strain fitness (log2 ratio) -1
0
1 at 75.103 kb on + strand, within Atu0072 at 75.109 kb on - strand, within Atu0072 at 75.111 kb on + strand, within Atu0072 at 75.111 kb on + strand, within Atu0072 at 75.121 kb on + strand, within Atu0072 at 75.187 kb on + strand, within Atu0072 at 75.346 kb on - strand, within Atu0072 at 75.378 kb on - strand, within Atu0072 at 75.439 kb on - strand, within Atu0072 at 75.439 kb on - strand, within Atu0072 at 75.439 kb on - strand, within Atu0072 at 75.508 kb on - strand, within Atu0072 at 75.587 kb on - strand, within Atu0072 at 75.726 kb on - strand, within Atu0072 at 75.757 kb on - strand, within Atu0072 at 75.859 kb on - strand, within Atu0072 at 75.907 kb on - strand at 75.963 kb on - strand at 76.138 kb on - strand at 76.443 kb on + strand, within Atu0073 at 76.668 kb on + strand, within Atu0073 at 76.842 kb on + strand, within Atu0073 at 76.897 kb on + strand, within Atu0073 at 76.948 kb on - strand, within Atu0073 at 76.965 kb on - strand, within Atu0073 at 76.988 kb on + strand, within Atu0073 at 77.020 kb on + strand, within Atu0073 at 77.049 kb on + strand, within Atu0073 at 77.057 kb on - strand, within Atu0073 at 77.057 kb on - strand, within Atu0073 at 77.193 kb on + strand at 77.203 kb on + strand at 77.216 kb on - strand at 77.316 kb on + strand, within Atu0074 at 77.378 kb on - strand, within Atu0074 at 77.405 kb on + strand, within Atu0074 at 77.454 kb on + strand, within Atu0074 at 77.530 kb on + strand, within Atu0074 at 77.564 kb on - strand, within Atu0074 at 77.660 kb on - strand, within Atu0074 at 77.693 kb on + strand, within Atu0074 at 77.730 kb on + strand, within Atu0074 at 77.740 kb on + strand, within Atu0074 at 77.768 kb on + strand, within Atu0074 at 77.776 kb on - strand, within Atu0074 at 77.806 kb on + strand, within Atu0074 at 77.812 kb on + strand, within Atu0074 at 77.841 kb on - strand, within Atu0074 at 77.883 kb on + strand at 77.883 kb on - strand at 77.888 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methyl beta-D-glucopyranoside (C) remove 75,103 + Atu0072 0.26 +0.9 75,109 - Atu0072 0.27 +0.5 75,111 + Atu0072 0.27 -0.2 75,111 + Atu0072 0.27 -0.4 75,121 + Atu0072 0.28 +0.0 75,187 + Atu0072 0.33 +0.2 75,346 - Atu0072 0.46 +0.3 75,378 - Atu0072 0.48 +0.0 75,439 - Atu0072 0.53 -0.2 75,439 - Atu0072 0.53 +0.1 75,439 - Atu0072 0.53 +0.2 75,508 - Atu0072 0.59 -0.0 75,587 - Atu0072 0.65 +0.2 75,726 - Atu0072 0.76 +0.2 75,757 - Atu0072 0.79 +0.1 75,859 - Atu0072 0.87 +0.4 75,907 - -0.3 75,963 - +0.7 76,138 - -0.1 76,443 + Atu0073 0.35 +0.1 76,668 + Atu0073 0.55 +0.2 76,842 + Atu0073 0.71 +0.9 76,897 + Atu0073 0.76 +0.9 76,948 - Atu0073 0.80 +0.1 76,965 - Atu0073 0.82 +0.4 76,988 + Atu0073 0.84 +0.6 77,020 + Atu0073 0.86 -0.3 77,049 + Atu0073 0.89 +0.1 77,057 - Atu0073 0.90 +0.3 77,057 - Atu0073 0.90 +0.5 77,193 + +0.2 77,203 + -0.3 77,216 - -1.6 77,316 + Atu0074 0.16 -1.4 77,378 - Atu0074 0.24 +0.2 77,405 + Atu0074 0.28 +0.2 77,454 + Atu0074 0.34 -0.3 77,530 + Atu0074 0.44 -1.3 77,564 - Atu0074 0.48 -0.4 77,660 - Atu0074 0.61 +0.0 77,693 + Atu0074 0.65 -0.9 77,730 + Atu0074 0.70 -0.3 77,740 + Atu0074 0.72 +1.1 77,768 + Atu0074 0.75 -0.1 77,776 - Atu0074 0.76 +0.4 77,806 + Atu0074 0.80 -1.6 77,812 + Atu0074 0.81 +0.5 77,841 - Atu0074 0.85 -0.2 77,883 + +0.3 77,883 - -0.1 77,888 - -0.2
Or see this region's nucleotide sequence