Experiment: Wcs_0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03430 and PS417_03435 overlap by 4 nucleotides PS417_03435 and PS417_03445 are separated by 566 nucleotides PS417_03445 and PS417_03450 are separated by 191 nucleotides
PS417_03430: PS417_03430 - methyltransferase type 11, at 789,520 to 790,326
_03430
PS417_03435: PS417_03435 - cytochrome P450, at 790,323 to 792,323
_03435
PS417_03445: PS417_03445 - tRNA-Met, at 792,890 to 792,966
_03445
PS417_03450: PS417_03450 - RNA polymerase sigma factor, at 793,158 to 793,709
_03450
Position (kb) 790
791
792
793 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 789.631 kb on + strand, within PS417_03430 at 789.632 kb on - strand, within PS417_03430 at 789.669 kb on + strand, within PS417_03430 at 789.670 kb on - strand, within PS417_03430 at 790.253 kb on + strand at 790.253 kb on - strand at 790.253 kb on - strand at 790.280 kb on + strand at 790.281 kb on - strand at 790.281 kb on - strand at 790.281 kb on - strand at 790.419 kb on + strand at 790.532 kb on + strand, within PS417_03435 at 790.532 kb on + strand, within PS417_03435 at 790.533 kb on - strand, within PS417_03435 at 791.018 kb on - strand, within PS417_03435 at 791.055 kb on + strand, within PS417_03435 at 791.245 kb on - strand, within PS417_03435 at 791.323 kb on + strand at 791.444 kb on - strand, within PS417_03435 at 791.444 kb on - strand, within PS417_03435 at 791.444 kb on - strand, within PS417_03435 at 791.959 kb on + strand, within PS417_03435 at 792.207 kb on + strand at 792.466 kb on - strand at 792.466 kb on - strand at 792.466 kb on - strand at 792.633 kb on + strand at 792.634 kb on - strand at 792.634 kb on - strand at 793.235 kb on + strand, within PS417_03450 at 793.294 kb on + strand, within PS417_03450
Per-strain Table
Position Strand Gene LocusTag Fraction Wcs_0.1 remove 789,631 + PS417_03430 0.14 +0.8 789,632 - PS417_03430 0.14 +0.8 789,669 + PS417_03430 0.18 -0.3 789,670 - PS417_03430 0.19 +0.9 790,253 + -1.2 790,253 - +0.1 790,253 - +0.3 790,280 + -1.0 790,281 - +0.4 790,281 - +4.3 790,281 - +2.3 790,419 + +0.3 790,532 + PS417_03435 0.10 +0.3 790,532 + PS417_03435 0.10 -0.8 790,533 - PS417_03435 0.10 +1.5 791,018 - PS417_03435 0.35 +0.4 791,055 + PS417_03435 0.37 +0.3 791,245 - PS417_03435 0.46 +1.1 791,323 + -0.7 791,444 - PS417_03435 0.56 -0.1 791,444 - PS417_03435 0.56 +0.5 791,444 - PS417_03435 0.56 +1.9 791,959 + PS417_03435 0.82 +1.3 792,207 + -0.3 792,466 - +1.9 792,466 - -1.5 792,466 - +1.2 792,633 + -1.0 792,634 - +1.2 792,634 - +2.9 793,235 + PS417_03450 0.14 +0.2 793,294 + PS417_03450 0.25 +0.2
Or see this region's nucleotide sequence