Experiment: Wcs_0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_18425 and PS417_18430 are separated by 247 nucleotides PS417_18430 and PS417_18435 are separated by 211 nucleotides PS417_18435 and PS417_18440 are separated by 95 nucleotides PS417_18440 and PS417_18445 are separated by 19 nucleotides
PS417_18425: PS417_18425 - sporulation protein, at 4,010,470 to 4,010,850
_18425
PS417_18430: PS417_18430 - carbon storage regulator CsrA, at 4,011,098 to 4,011,292
_18430
PS417_18435: PS417_18435 - hypothetical protein, at 4,011,504 to 4,011,743
_18435
PS417_18440: PS417_18440 - hypothetical protein, at 4,011,839 to 4,012,132
_18440
PS417_18445: PS417_18445 - glycerol-3-phosphatase, at 4,012,152 to 4,012,829
_18445
Position (kb)
4011
4012 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4010.628 kb on - strand, within PS417_18425 at 4010.844 kb on + strand at 4010.884 kb on + strand at 4010.943 kb on - strand at 4010.955 kb on + strand at 4010.955 kb on + strand at 4010.956 kb on - strand at 4010.975 kb on + strand at 4010.975 kb on + strand at 4010.975 kb on + strand at 4011.029 kb on + strand at 4011.029 kb on + strand at 4011.030 kb on - strand at 4011.034 kb on + strand at 4011.034 kb on + strand at 4011.035 kb on - strand at 4011.035 kb on - strand at 4011.035 kb on - strand at 4011.082 kb on - strand at 4011.104 kb on - strand at 4011.105 kb on + strand at 4011.105 kb on + strand at 4011.105 kb on + strand at 4011.106 kb on - strand at 4011.171 kb on + strand, within PS417_18430 at 4011.434 kb on + strand at 4011.434 kb on + strand at 4011.434 kb on + strand at 4011.435 kb on - strand at 4011.547 kb on + strand, within PS417_18435 at 4011.716 kb on + strand at 4011.717 kb on - strand, within PS417_18435 at 4011.773 kb on + strand at 4011.777 kb on + strand at 4011.777 kb on + strand at 4011.778 kb on - strand at 4011.797 kb on + strand at 4011.797 kb on + strand at 4011.797 kb on + strand at 4011.798 kb on - strand at 4011.798 kb on - strand at 4011.798 kb on - strand at 4011.798 kb on - strand at 4011.911 kb on - strand, within PS417_18440 at 4011.911 kb on - strand, within PS417_18440 at 4011.911 kb on - strand, within PS417_18440 at 4011.911 kb on - strand at 4011.915 kb on + strand, within PS417_18440 at 4011.915 kb on + strand, within PS417_18440 at 4011.916 kb on - strand, within PS417_18440 at 4012.174 kb on + strand at 4012.175 kb on - strand at 4012.200 kb on + strand at 4012.201 kb on - strand at 4012.207 kb on - strand at 4012.207 kb on - strand at 4012.216 kb on + strand at 4012.314 kb on + strand, within PS417_18445 at 4012.381 kb on + strand, within PS417_18445 at 4012.496 kb on + strand, within PS417_18445
Per-strain Table
Position Strand Gene LocusTag Fraction Wcs_0.1 remove 4,010,628 - PS417_18425 0.41 +2.4 4,010,844 + +0.0 4,010,884 + -0.5 4,010,943 - -0.1 4,010,955 + -1.1 4,010,955 + -0.5 4,010,956 - +1.2 4,010,975 + -0.3 4,010,975 + +0.8 4,010,975 + +1.1 4,011,029 + +0.6 4,011,029 + +1.2 4,011,030 - +1.1 4,011,034 + +0.0 4,011,034 + +1.8 4,011,035 - +1.5 4,011,035 - +0.8 4,011,035 - +3.2 4,011,082 - +1.8 4,011,104 - -0.2 4,011,105 + +1.0 4,011,105 + +1.0 4,011,105 + +1.8 4,011,106 - +1.6 4,011,171 + PS417_18430 0.37 +0.9 4,011,434 + +2.7 4,011,434 + +2.7 4,011,434 + +1.5 4,011,435 - +1.3 4,011,547 + PS417_18435 0.18 +2.2 4,011,716 + -1.5 4,011,717 - PS417_18435 0.89 -0.2 4,011,773 + +1.3 4,011,777 + -0.2 4,011,777 + +0.6 4,011,778 - -1.8 4,011,797 + -0.6 4,011,797 + +0.7 4,011,797 + +0.8 4,011,798 - +0.7 4,011,798 - -0.2 4,011,798 - +2.1 4,011,798 - +1.3 4,011,911 - PS417_18440 0.24 +0.0 4,011,911 - PS417_18440 0.24 -0.1 4,011,911 - PS417_18440 0.24 +1.9 4,011,911 - -0.2 4,011,915 + PS417_18440 0.26 -1.1 4,011,915 + PS417_18440 0.26 +0.2 4,011,916 - PS417_18440 0.26 -1.8 4,012,174 + -0.0 4,012,175 - -2.1 4,012,200 + +0.7 4,012,201 - -0.6 4,012,207 - +0.2 4,012,207 - +0.3 4,012,216 + -1.0 4,012,314 + PS417_18445 0.24 +1.7 4,012,381 + PS417_18445 0.34 -0.2 4,012,496 + PS417_18445 0.51 +1.1
Or see this region's nucleotide sequence